ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5104_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2854..4692)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035F36DF similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 612.0
  • Bit_score: 908
  • Evalue 2.90e-261
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJC68901.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 612.0
  • Bit_score: 908
  • Evalue 4.10e-261
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 609.0
  • Bit_score: 899
  • Evalue 7.30e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGTCGGCACGGTGGAAGATGGGTCTGGCGGCGGTTTTCGTCTGTGGCATGGTTTTGCAGCCGGTCGCCCCCCGCGCCGAGGAGGCGCTGGTCTGGCGCCATGCGCTGTCGAGCATCGGCGAGCCGAAACTGCCGCAGGGCTTTGCCCATTACGACTATGTCAACACGCAGGCCCCGAAGGGGGGCACGCTGAACCTTTCGGAAGCCGGCACGTTCGACAGCTTCAATTCCGTGCTGGCCAAGGGCGAGCAACCGTCCAGCCTGTCGCTGGTCTACGACACGCTGCTGACCTCCTCCGAGGACGAGGTGCTGACGTCTTATGGCCTGTTGGCCGAGGCGATCGCCTATCCGGACGACCTTTCCTACGCCTCGTTCCGTCTGCGGGCGGAAGCGAAATGGGCGGACGGCAAGCCGGTGACGCCGGAAGACGTGATCTTTTCCTTCGAGAAGGCGAAAGAACTCGATCCGCGCATGTCCGTCTATTACGCGCATGTCGTCTCCGCCGAAAAAACCGGCGAGCGCGAGGTGACCTTCCGCTTCGACGAGAAGAACAATCGCGAGTTGCCGAACATCCTCGGCCAGTTCCTGATCGTTCCCAAGCATTGGTGGGAAGGCAAGGACGACAAGGGCAACCAGCGCGACATCGCCAAGACGACGCTGGAGCCGGCCATGGGCTCCGGCCCATACCGCATAGCCGCCTTCTCGCCAGGCTCAACGATCCGTTACGAATTGCGCGACGACTATTGGGCCAAAGACCTCAACGTCAACGTCGGCCGGAACAATTTCAAGGTGATCAACTATAATTTCTATGCCGATTTCGACGTCGAGCTGGAGGCCTTCCGTGCCGGCAATGTCGATTTCCGCCGTGAAAACAGCGCCAGCCGCTGGGCGACGGGATATGATTTCCCGGCGGTGAAGGACGGCCGCGTCAAGCGCGAGGAGGTTGAAAATCCGCTGCGCGCCACCGGCATCATGCAGGCGCTGGTGCCCAACCTGCGCCGTGACCAGTTCAAGGATCCGCGCGTGCGGCTGGCGCTCAACTATGCCTTCGATTTCGAGGATTTGAACCGCACCCTCGCCTTCAACGCCTTCAAGCGCATCGACAGCTATTTCTGGGGCACGGAGCTGGCCTCCTCCGGCCTGCCGCAGGGCCGCGAGCTGGAAATCCTCGATGGCCTGAAGGACAGGGTGCCGCCGGAGGTCTTCACCACGCCCTATACCAATCCGGTCGGCGGCGATCCGCAGAAGAGCCGCGACAACCTGCGCAAGGCCATCGGCCTGCTGAAGGAGGCCGGCTGGACGCTGAAGGGTAACCGCATGGTCAACGAAAAGACCGGGCAGCCGCTTTCCATCGAGATCCTTCTCGGCAGCCAGTCCTTCGAGCGCACCGTGCTGCCCTTCGCCAACAATCTCAAAAAGATCGGCATCGATGCACGGCTTCGCACCGTCGACGCCTCGCAATATACCAATCGCGTCCGCAGTTTCGATTACGACATGATCTACCAGGTCTGGGCCGAGACGCTGAACCCCGGCAATGAGCAGGCCGAATTCTGGGGATCGGCCGCCGCCGACCGGCCGGGTTCGCGCAATTATGCCGGCATCGCCGATCCCGCGGTCGACGCGCTGATCAAAATGATCATCTTCGCATCCAACCGCGACGAGCAGGTGGCGGCGATCAAGGCGATGGACCGGGTGCTGCTCGCCAATCACTACGTCGTGCCGCTGTTCTACTCCGGCAACCAGCGCATCGCCTACTGGAACCGCATCGCCCATGGGCGCTTCCCGGAATACGGGCTCGACTTCCCCGCCGCCTGGTGGTCTGCGGAGGCCGCGAAGTAA
PROTEIN sequence
Length: 613
MSARWKMGLAAVFVCGMVLQPVAPRAEEALVWRHALSSIGEPKLPQGFAHYDYVNTQAPKGGTLNLSEAGTFDSFNSVLAKGEQPSSLSLVYDTLLTSSEDEVLTSYGLLAEAIAYPDDLSYASFRLRAEAKWADGKPVTPEDVIFSFEKAKELDPRMSVYYAHVVSAEKTGEREVTFRFDEKNNRELPNILGQFLIVPKHWWEGKDDKGNQRDIAKTTLEPAMGSGPYRIAAFSPGSTIRYELRDDYWAKDLNVNVGRNNFKVINYNFYADFDVELEAFRAGNVDFRRENSASRWATGYDFPAVKDGRVKREEVENPLRATGIMQALVPNLRRDQFKDPRVRLALNYAFDFEDLNRTLAFNAFKRIDSYFWGTELASSGLPQGRELEILDGLKDRVPPEVFTTPYTNPVGGDPQKSRDNLRKAIGLLKEAGWTLKGNRMVNEKTGQPLSIEILLGSQSFERTVLPFANNLKKIGIDARLRTVDASQYTNRVRSFDYDMIYQVWAETLNPGNEQAEFWGSAAADRPGSRNYAGIADPAVDALIKMIIFASNRDEQVAAIKAMDRVLLANHYVVPLFYSGNQRIAYWNRIAHGRFPEYGLDFPAAWWSAEAAK*