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SCNpilot_expt_1000_bf_scaffold_2614_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(11781..13034)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraI n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HQP6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 417.0
  • Bit_score: 779
  • Evalue 1.40e-222
Conjugal transfer protein TraI {ECO:0000313|EMBL:EQB01650.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 417.0
  • Bit_score: 779
  • Evalue 2.00e-222
Conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 419.0
  • Bit_score: 653
  • Evalue 6.20e-185

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
GTGAGCGAGATCGATCCCGATAAGGAGGAAGGCCGCAAGTCCGGGCTGGAACCCCAGCCGGAGTCCGACGATGAAGCCCGGCCGCTGACCGGAGAACCGGCCGCGCCGATGCGGCTGCGTCCCGAGCCGCCGCGCGTCACGCGGCTCTCGCGTAAGGTGTTGGCCAGCCTAGGCCTGGTCGCCGGTGTTGGTATCGGCGGCGCGCTGATCTATGCGCTTCAGGTCCAGCATAGCGGCCGGTCGAACGAGGAGCTGTATTCGACCGATAACCGGACGACACCGGACGGCCTCAACACCCTGCCGAAGGACTATACCGGCCCGGTCCTCGGCCCACCGCTGCCAGGCGATCTCGGTCACCCTATCCTCGATGCGCAGAACCGCGGCCAGCCTGTGACGCCGTCACGGATCGGCACCCCTGCCGTGCAGCCCGGCCTCAGCGCCGAGGAACAGCGCCGATTGCAGGAACTGGAGGCTGCGAGGACCGCGCGCCTCTTCACCTCGACCGAGACGCGCAACATGGCGTCGCCCGCCACCACGGCAACAACCACAACGCCGCCCCTGCCGGATCTGACCGGTCTCGGCCTCGCGCCGCAGCCAGCGACGCCCTCGGCGCAGGACCGGCAGCTCGCCTTCCTCAACCAGGCGCCCGACAAACGCACCGTCTCGACCGATCGCGTCGCCGCTCCGGCATCGGCAAACATCCTTCAAGCGGGCGCGGTGATTTCCGCCGCGCTCATCACCGGCATTCGTTCCGACCTGCCTGGCCAGATCACGGCGCAGGTGACGGAGAATATCTATGACAGCCCGACCGGGCGCATCCTTCTCATCCCGCAGGGCACGCGTGTCATCGGTCAGTATGACAACGGCGTCGGTTTCGGCCAGCGCCGCATCCTGCTCGTCTGGAACCGGCTGATTTTCCCGAACGGCCGTTCGATCGTGCTGGAACGCCAGCCGGGCGCGGACACGCAAGGCTATGCCGGCCTGGAGGATGGCGTCGATTATCACTGGGGTGAACTGTTCAAAGCCGCCGCGCTCTCGACGCTGCTCAGCATCGGTTCGCAGGCCGGTTCGTCGGACGAGGAAAGCGAGATCGTCCGGGCCCTGCGCCAGGGCGCTGGCGACAGTATCAGCCAGACCGGACAGCAGATCGTCAGCCGCCAGCTCAACATCGCGCCGACATTGACGATCCGGCCGGGTTTCCCCGTCCGCGTGATCGTCACGCGCGATCTCGTACTCGAACCCTATGGAAGCTGA
PROTEIN sequence
Length: 418
VSEIDPDKEEGRKSGLEPQPESDDEARPLTGEPAAPMRLRPEPPRVTRLSRKVLASLGLVAGVGIGGALIYALQVQHSGRSNEELYSTDNRTTPDGLNTLPKDYTGPVLGPPLPGDLGHPILDAQNRGQPVTPSRIGTPAVQPGLSAEEQRRLQELEAARTARLFTSTETRNMASPATTATTTTPPLPDLTGLGLAPQPATPSAQDRQLAFLNQAPDKRTVSTDRVAAPASANILQAGAVISAALITGIRSDLPGQITAQVTENIYDSPTGRILLIPQGTRVIGQYDNGVGFGQRRILLVWNRLIFPNGRSIVLERQPGADTQGYAGLEDGVDYHWGELFKAAALSTLLSIGSQAGSSDEESEIVRALRQGAGDSISQTGQQIVSRQLNIAPTLTIRPGFPVRVIVTRDLVLEPYGS*