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SCNpilot_expt_1000_bf_scaffold_8208_curated_6

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6054..7361)

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F332_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 435.0
  • Bit_score: 720
  • Evalue 8.00e-205
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:EHS52897.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 435.0
  • Bit_score: 720
  • Evalue 1.10e-204
lolE; lipoprotein ABC transporter membrane spanning protein; K09808 lipoprotein-releasing system permease protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 422.0
  • Bit_score: 712
  • Evalue 9.00e-203

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGGCGGTGGACGCGGGTAAGCAGGAGACGGTCGCGCTCGGAAAGAGCAAGGCCGGACGGCCGTTCTCGGCCTTCGAGCGGGTCGTGGCATGGCGATATCTGCGCGCCAGGCGCAAGGAAGCCTTCATCTCTGTGATCGCGGGATTCTCCTTCCTCGGCATCATGCTGGGCGTGGCCACGCTGATCATCGTCATGGCGGTGATGAACGGGTTCCGCACCGAGCTGATCTCGCGCATCCTCGGCGTCAACGGTCACATGATCGTCCAGCCGATCGATTCGCCGCTGGAAAACTACGGCGCTTTGGCGAAGAAATTCTCGACCATCCCGGGCGTCACCATGGCGCTGCCGCTGGTCGAGGGCCAGACATTGGCCTCGGGCAAGGGCGGCGCCGGCACCGGCGCGCTGGTGCGCGGCATCCGCGCCGACGATCTCAAGGCCCTGAAGACGATTTCCGGCAATATCAAGAGCGGCAATATCGACGGCTTCGTTGCCGGTGACGGCGTGCTCGTCGGCTCGCGCATGGCCGCCCAGCTCGGGCTCACCGCCGGCGACCAGATCACGCTGATGTCGCCGGAAGGCGACGTGACGCCGATGGGCGTCAACCCGCGCATCAAGTCCTACACCGTCTCGGGTATCTTCGAGATCGGTATGTCGGAATATGACGCGTCGATGATCTATATGCCGCTCGAGGAAGCGCAGCTCTATTTCAACGCCGAAGGCATCGTGCAATCGATCGAGCTGTTCGTTTCCAATCCGGATGACGTGGACGAATTGCGGCCGAAGATCGAGGATGCGGCGGAGCGGCAGGTCTTCATCACCGACTGGCGACAGCGAAACCAGACCTTCTTCTCGGCCTTGCAGGTCGAACGCAACGTCATGTTCATGATCCTGACGCTGATCGTGCTGGTCGCGGCGCTGAACATCATCTCCGGGCTGATCATGCTGGTAAAGGACAAGGGCAGCGATATCGCCATCCTGCGCACCATGGGCGCGACCTCCGGGTCGATCATGCGCATCTTCTTCATGACGGGCGCGGCGATCGGCACGGCCGGCACCTTTGCCGGTGTGTTGCTCGGCGTCATCGTCTGTCTGAACATCGAATCGATCCGTCAATTCTTCTCCTGGGTCTCGGGCACGGTGCTGTTCGATCCCGAACTCTATTTCCTCAGCCAGTTGCCGGCGGACATGAATGTCGGCGAGACGGTCTCTGTGGTGGTGATGGCGTTGACGCTGTCGTTCATCGCGACCATCGTTCCCGCCTGGCGAGCCTCGCGGCTCGATCCGGTGCAGGCGCTGCGATACGAATAA
PROTEIN sequence
Length: 436
MAVDAGKQETVALGKSKAGRPFSAFERVVAWRYLRARRKEAFISVIAGFSFLGIMLGVATLIIVMAVMNGFRTELISRILGVNGHMIVQPIDSPLENYGALAKKFSTIPGVTMALPLVEGQTLASGKGGAGTGALVRGIRADDLKALKTISGNIKSGNIDGFVAGDGVLVGSRMAAQLGLTAGDQITLMSPEGDVTPMGVNPRIKSYTVSGIFEIGMSEYDASMIYMPLEEAQLYFNAEGIVQSIELFVSNPDDVDELRPKIEDAAERQVFITDWRQRNQTFFSALQVERNVMFMILTLIVLVAALNIISGLIMLVKDKGSDIAILRTMGATSGSIMRIFFMTGAAIGTAGTFAGVLLGVIVCLNIESIRQFFSWVSGTVLFDPELYFLSQLPADMNVGETVSVVVMALTLSFIATIVPAWRASRLDPVQALRYE*