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SCNpilot_expt_1000_bf_scaffold_3138_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 668..1600

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 310.0
  • Bit_score: 559
  • Evalue 9.10e-157
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agro similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 310.0
  • Bit_score: 559
  • Evalue 4.00e-156
tRNA pseudouridine synthase B n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGT2_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 310.0
  • Bit_score: 559
  • Evalue 2.90e-156

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGTCCAAACCGCGTAAACCCAAGGGCCGGCCGATTTCCGGCTGGATCATTCTCGACAAGCCGGTGGATTTCGGCTCGACCGAGGCCGTCTCCAAGATCAAGTGGCTGTTCAATGCCCAGAAGGCGGGACACGCCGGCACGCTCGATCCGCTGGCGTCCGGCATGCTGCCGATCGCGCTCGGCGACGCCACCAAGACCGTGCCTTATGTCATGGACGGCCGCAAGATCTACGAATTCACCGTCAGCTGGGGCGAGGAGCGCACCACGGACGATCTCGAAGGCGAGGTGACGCAGTCCTCGGCAAGCCGCCCGGCGGAAGAGGCGATCCGCGCTCTGCTGCCGCGCTATACCGGCGTCATCGAGCAGATCCCGCCGCAGTTTTCCGCCATCAAGATCGCCGGCGAGCGCGCCTACGATCTCGCCCGCGAGGGCGAGACGGTAGTCATCCCGGCCCGCGAAGTTGAAATCTTCCGCCTGACGCTGCTGGCCTGCCCGGACGAAAACACCGCCTGCTTCGAGGTCGAATGCGGCAAGGGCACCTATGTGCGGGCCTTGGCGCGCGATTTCGGCCGTGAGCTCGGTTGCTACGGGCATATTTCGGAGCTGCGCCGCACCTTCGTCGCGCCGTTTGCCGAGGAGCAGATGGTGCCGCTGGAGACGCTGACGGCGCTGGAAGCGGTCGAGGACCGCGACGAGCGGCTGGCCGCACTCGATGCCTTCCTGGTCGATACCGGCGAAGCGCTTTCCAACCTGCCGCATATTGCCGTCAACGACGACCAGGCGCACCGCCTGAAGATGGGCAATCCGATCATCCTGCGCGGGCGCGATGCGCCCGTGGCCGAGCCGGAAGCCTATGCCACCGCGCGCGGAAAACTGATCGCCATCGGCGAGATCGGCGAAGGCGAGTTCCGGCCGAAGCGTGTCTTCGGCTAA
PROTEIN sequence
Length: 311
MSKPRKPKGRPISGWIILDKPVDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGMLPIALGDATKTVPYVMDGRKIYEFTVSWGEERTTDDLEGEVTQSSASRPAEEAIRALLPRYTGVIEQIPPQFSAIKIAGERAYDLAREGETVVIPAREVEIFRLTLLACPDENTACFEVECGKGTYVRALARDFGRELGCYGHISELRRTFVAPFAEEQMVPLETLTALEAVEDRDERLAALDAFLVDTGEALSNLPHIAVNDDQAHRLKMGNPIILRGRDAPVAEPEAYATARGKLIAIGEIGEGEFRPKRVFG*