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SCNpilot_expt_1000_bf_scaffold_1637_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5993..6811)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2LEX8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 263.0
  • Bit_score: 516
  • Evalue 1.40e-143
Strain MEJ076 contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ03788.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 272.0
  • Bit_score: 523
  • Evalue 1.70e-145
putative permease component of ABC transporter; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 263.0
  • Bit_score: 515
  • Evalue 7.70e-144

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAACAATCGATCCATGGGCGAGCGGCTTTCCTTCCTGGTGCCGACCCTCTACATCCTCTTCCTGCTGCTGCCGATCTACTGGCTGGTCAATATGAGCTTCAAGGAAAACGCCGAGATCACCGGCGCCTTCTCGCTCTGGCCGACCAACCCGACGCTGCGCAACTACACGATCATCTTCACCGATCCCTCCTGGTACAACGGCTATATCAATTCGATCATCTATGTGGTGATGAACACGGTGATCTCGGTGGCGGCGGCGCTGCCGGCGGCCTATGCCTTCTCGCGCTACCGTTTCCTCGGCGACAAGCACCTGTTCTTCTGGCTGCTGACCAACCGCATGGCGCCGCCGGCCGTCTTCGCGCTGCCCTTCTTCCAGCTCTATTCGGCCTTCGGCCTGATCGATACGCATATCGCTGTCGCCATCGCCCACTGCCTGTTCAACGTGCCGCTGGCGGTGTGGATTCTCGAAGGCTTCATGTCAGGCGTGCCGAAGGAAATCGACGAGACCGCCTATATCGACGGCTATTCCTTCCCGAAATTCTTCGTGAAGATTTTCATGCCGCTGATCGCGTCGGGCATCGGCGTCGCCGCCTTCTTCTGCTTCATGTTCTCCTGGGTGGAGCTGCTGCTGGCGCGCACGCTGACCACCACCGCCGCCAAGCCGATCGCCGCGACGATGACGCGCACGGTCTCGGCATCGGGCATGGACTGGGGCGTGCTGGCGGCGGCCGGCGTGCTGACCATCGTTCCGGGGGCGCTGGTCATCTATTTCGTGCGCAACTACATCGCCAAGGGCTTTGCCCTGGGCCGCGTGTGA
PROTEIN sequence
Length: 273
MNNRSMGERLSFLVPTLYILFLLLPIYWLVNMSFKENAEITGAFSLWPTNPTLRNYTIIFTDPSWYNGYINSIIYVVMNTVISVAAALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSAFGLIDTHIAVAIAHCLFNVPLAVWILEGFMSGVPKEIDETAYIDGYSFPKFFVKIFMPLIASGIGVAAFFCFMFSWVELLLARTLTTTAAKPIAATMTRTVSASGMDWGVLAAAGVLTIVPGALVIYFVRNYIAKGFALGRV*