ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2456_curated_22

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(18286..20322)

Top 3 Functional Annotations

Value Algorithm Source
peptidoglycan-binding protein LysM n=1 Tax=Rhizobium mongolense RepID=UPI0003B601A9 similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 695.0
  • Bit_score: 638
  • Evalue 8.10e-180
Peptidoglycan-binding/lysin domain-containing protein {ECO:0000313|EMBL:AJD40669.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 688.0
  • Bit_score: 649
  • Evalue 5.00e-183
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 706.0
  • Bit_score: 592
  • Evalue 1.20e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2037
ATGAAAAACAGGCGTGCCGGCTTGCTGGCCCTCTTGGTTGTCGTGGCGGCAACCCTTCTGATGGTGTTTTTCGTGCTGCCGCGCATCGGCAATGACGACAAGGCGAAGGAGACGGCATCGAAGCCGGCCCCGCAGACGGAAACGGCCGCCCAACAGCCGCCTGAGCCGGCCGCCCCTGCCGCCATCGATGCCGCCAAGTTGACCGGGACGCTGAACGGTCTTTCGAAGGACGCGCTTGCCGCGATCGGCACGCTGAAGACCCTGTTCTCGGCTGCGACCGCGCCCGATGCCAAGGCGGTTTCGGAAGCGAAAGCCAAGTCTGGGGACGCGCTGCAGGCGGTTGCCGATTTCGCCCTGCCACAAGGCCTCGACGCCACGGCCGCCGCGCCGCTGAACCTGATCCGCGACGGCGCCCGCAAGGGCCTCGACCTGCTCAAGACCCTGCCGGACGCGCCGGCCGATGCACTGAAGGTGCTGGCCGAGATCGAATCCGCCCTGACCGGCAAGCCGGTCGCGGCTCCGGCCGATGCGGCCGCCTCGGCCAAGACCGACCGGCCGAGCGCCGCTGCAGCCTCGGACGAGACCATGCCCGCCTTCGACGTCTTGCGCGTCGAGCCCGATGGCTCCACCGTCATCGCCGGCCGCGCCGCGCCGAATTCCAAGATCGAGATCATGAGCGGCGACAAGGTCGTCAGCAGCGTCGATGTCGGCGCCAGCGGCGATTTCGCCGCCATCCTCGATGCACCGCTGCCGGCCGGCGACCACCAACTCGTGTTGAAGGCGACCGCCAAGGACGGCAAGTCGGTGATCTCCCAGGAAGTAGCGACCGTTTCCATCCCGCAGGACAAGAGCGGCGAATTGCTGGCCATGGTCACCAAGCCCGGCGAGGCGAGCCGCATCATCACCGCACCGGACGAGACCGCCAAGCCGCAGGCGCCCGAAAATGGCGCGGCGACGCCCGAATTGCCCGCCGCTTCCGGCGATCTCGCCTCGACCGCGCCAGCCGTCTCCACCAACGGCACCGCCGCGCCGCAGCCGACGAACGCCGACAATGCCGATGCCCAGCTTCGCGTCACCGCCGTCGAAATCGAGGGCAGCAAGATTTTCGTGGCCGGTATCGCCGCCTCCAAGGCCAATGTCGCCGGCTATGCCGACGACAAGCCGATCGGCAAGGCGACCGCAGCGGCCGAGGGCCATTTCGTCATCGAGGGCATGATCGATCTCGACGTCGGCGACCATACGATCCGCGTCGACATGCTGGACGCGGCCGGCAAGGTGGCGGTGCGCGCCTCGGTACCGTTCACACGTCCGGCCGGCAACCAGGTCTCGGTCGTTGCCCAGCCGGGCAATGCCGCCGGCATCGACGCCGCCAGCCTCGACCCGGCCTTCCGCAAGCTCCACAGCGACCTGTCGACGGCGCTCGGCCTGCTGCGCAATCTCTTCGCGGGCGGTCAGCTTCCGGCCGGCGATGCGCTGGCCGCCGCCCGCTCAGCGACGGAGATCGCGCTGAAATCGCTCTCCGATTTCCAGGCCGCCCCCGACAGCACCGCCGGCTTCAAGGAGATCGCCGCCAAGACCAGCGCCAGCGCCGCCAAGGCATTGACGNNNNNNNNNGCCCTGCCGCGCGACGCCCAGGCCTTCGGCGCCTCGCTGGAGATACTGACGGCGCTGATCGACGACACGCTGCGTCTGGCACCGCAGGCGACTTCGCCCGCCGTGGCGCAGGCGCCGCAACCGACTGCACAAGCGCAGGCCGATGCCGGCGCGGAAGCCGCGGGCGCACCGGTGACCATCTCGCAGGCGCCGCTGACGCAGAGCAACGAGTCGGTGATCATCCGCCGTGGCGACACTTTGTGGCAGATCTCGCGCCGCGTGTATGGCGCCGGCGTGCGCTACACCACGATCTATCTCGCCAACCGCCAGCAGATCAACAATCCCGACCGCATCCGCCCCGGGCAGATTTTCGGCCTGCCGAAGGATGCCCGCCCGGATTCGGAAGAATTGCACCGCAAGCGCCTGCACGGTGACAGGCTGTAA
PROTEIN sequence
Length: 679
MKNRRAGLLALLVVVAATLLMVFFVLPRIGNDDKAKETASKPAPQTETAAQQPPEPAAPAAIDAAKLTGTLNGLSKDALAAIGTLKTLFSAATAPDAKAVSEAKAKSGDALQAVADFALPQGLDATAAAPLNLIRDGARKGLDLLKTLPDAPADALKVLAEIESALTGKPVAAPADAAASAKTDRPSAAAASDETMPAFDVLRVEPDGSTVIAGRAAPNSKIEIMSGDKVVSSVDVGASGDFAAILDAPLPAGDHQLVLKATAKDGKSVISQEVATVSIPQDKSGELLAMVTKPGEASRIITAPDETAKPQAPENGAATPELPAASGDLASTAPAVSTNGTAAPQPTNADNADAQLRVTAVEIEGSKIFVAGIAASKANVAGYADDKPIGKATAAAEGHFVIEGMIDLDVGDHTIRVDMLDAAGKVAVRASVPFTRPAGNQVSVVAQPGNAAGIDAASLDPAFRKLHSDLSTALGLLRNLFAGGQLPAGDALAAARSATEIALKSLSDFQAAPDSTAGFKEIAAKTSASAAKALTXXXALPRDAQAFGASLEILTALIDDTLRLAPQATSPAVAQAPQPTAQAQADAGAEAAGAPVTISQAPLTQSNESVIIRRGDTLWQISRRVYGAGVRYTTIYLANRQQINNPDRIRPGQIFGLPKDARPDSEELHRKRLHGDRL*