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SCNpilot_expt_1000_bf_scaffold_4909_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1..630)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE52_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 202.0
  • Bit_score: 224
  • Evalue 8.70e-56
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 202.0
  • Bit_score: 224
  • Evalue 2.70e-56
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 194.0
  • Bit_score: 281
  • Evalue 1.10e-72

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Taxonomy

RHI_Rhodobacterales_62_75 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGCGCATATTCGACCGACTTCTGCCCGAACACAACAAACGCCTGAAGATGCTGCTGGCCTCGGCCTTGACGGGCGGCCTTGCATATATCGCCGCAATCGCTCCGGCGACGGCGGCGACCGTCGACAAGAAGGACATGGTGATGGTCGTGTCCGTCATCAACACCACCAATCCCTATATGATTTCGAATATTGAAGGTGCGAAAGCGCTGTCGGAGAAGCTGGAAATCCCGCTCGAGGTGGTCAACTCCAACAATTCCTCCCAGACCGAGATCTCATCCATCCTGTCGATCCTGGCAAGCGGCAAGAAGGTGATCATGTTCGTGAACACCGTCGCCAGCTCCGACGCGCCGACGATCGTCGACGCCGTGAAGCAGGCGGGCGGCTACGTCACGATCTGGTGGAACAAGCCGACGGACTATAAGCCGCAGAGCGTCGGCGACAATTTCGTGGCCTTCCAGAAGATTCCCGGAGTTGAATCCAGTCGTTGCGGTGCGAAGGCGATCGGCGACGCCCTTGGCGGAAAGGGCAGCGTCGTGATGTTCCCCGGCGTGCAGGACAGCACCACCAGCAAGACCCGCGTTGCCGGGTTCAAGACGGAGATGAAGGAGAAATATCCGAACATCAAGATC
PROTEIN sequence
Length: 210
MRIFDRLLPEHNKRLKMLLASALTGGLAYIAAIAPATAATVDKKDMVMVVSVINTTNPYMISNIEGAKALSEKLEIPLEVVNSNNSSQTEISSILSILASGKKVIMFVNTVASSDAPTIVDAVKQAGGYVTIWWNKPTDYKPQSVGDNFVAFQKIPGVESSRCGAKAIGDALGGKGSVVMFPGVQDSTTSKTRVAGFKTEMKEKYPNIKI