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SCNpilot_expt_1000_bf_scaffold_4909_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 5606..6853

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003711B6E similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 415.0
  • Bit_score: 684
  • Evalue 7.90e-194
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:EYR83024.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 415.0
  • Bit_score: 664
  • Evalue 9.10e-188
spermidine/putrescine ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 417.0
  • Bit_score: 414
  • Evalue 4.80e-113

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGGCCGACACGATGTCACTGACCGCACCCTATACCGACCCCGGCCTCGGCGCAGCACTTCGCCGGGCCGAACGGCCGAACCGCCTCCGGGCCCTGGCGCTGGCGTTGCCGGCGCTCGTCTTCCTGCTCGTCACCTTCGCCGCGCCGATCGGCGTCTTCCTGACGACGGCGGTGCGCAACCCGGAGGTCCACGAGATCCTGCCGCAGACCACCGTCGCGCTCGAAGGCTGGGACGGGCAGGCGACGCCCGGCGAAGAGGTCTTTGCCGCGCTCGCCGCCGATCTGGCCCGCGCCAGGCAGAACAATACCGCCGCCACGCTCGGCAAGCGGCTGAACTATGAAAGCCCTGGCATGCGCAGCCGCATCATGTCGGTGACGCGCAAGCTCGACGGCTTCGCCGCCGGCCCCCTCGCCCCGCAATTTATCGCCATCGATGCCGCCTGGGGCCAGCCGGATCTCTGGGCGATCATCCAGCGCAATGCAGCGCCGGTCACCCCCTATTACCTGCTGACATCGGTCGACCTCGGCCAGGATGCGGCCGGCGGCATCGTCCGCGTCGCGCAGGACCAGGCGGTGTTCCTCGACATTCTCGGCCGCACCCTCTGGATCGCCGGGCTCGTCACGGTCGCGACGCTGCTGCTCGGTTTCCCGACCGCCTATGTCATTTCGCTGGCGCCGGCGCGTATCGCCGGCTTCCTGCTGCTCATGGTGCTGTTGCCGCTGTGGACGTCGCTGCTGGTGCGCACCACCGCCTGGGTGGTGCTTTTGCAGACGGATGGCGTCATCAACCAAGTGCTTCTGGCGCTCGGCCTGACCAGCGAGAAGCTGCAACTGATGCTGACCCGCTTCGGCACGGTGACGGCCATGACGCATATCCAGCTACCCTTCACCATCCTGCCGATCCTCAGCGTCATGAAAACCATTCCCGCGGGCCAGTTGCGGGCGGCACGGTCGCTGGGCGCACCGGCCTTTTCCGCCTTCTGGCGGGTCTATGCGCCGCAGACGCTGCCCGGCGTCGCCGCCGGCTGCCTGATGACCTTCATCCTGTCGCTCGGTTACTACATCACCCCGGCGCTGGTCGGCGGCCCGCGCGACCAGATGATCTCGAATTTCATCGCCACCTATATCAACCGCGACCTGAACTGGGGCATGGCGGCCGCTCTTGCCTGCCTGCTCCTTTTCATGACGCTTTCCATCTATCTCCTGTTCCTGCGCCTCGTCGGCGCGGAGCGCATCAAGCTTGGATGA
PROTEIN sequence
Length: 416
MADTMSLTAPYTDPGLGAALRRAERPNRLRALALALPALVFLLVTFAAPIGVFLTTAVRNPEVHEILPQTTVALEGWDGQATPGEEVFAALAADLARARQNNTAATLGKRLNYESPGMRSRIMSVTRKLDGFAAGPLAPQFIAIDAAWGQPDLWAIIQRNAAPVTPYYLLTSVDLGQDAAGGIVRVAQDQAVFLDILGRTLWIAGLVTVATLLLGFPTAYVISLAPARIAGFLLLMVLLPLWTSLLVRTTAWVVLLQTDGVINQVLLALGLTSEKLQLMLTRFGTVTAMTHIQLPFTILPILSVMKTIPAGQLRAARSLGAPAFSAFWRVYAPQTLPGVAAGCLMTFILSLGYYITPALVGGPRDQMISNFIATYINRDLNWGMAAALACLLLFMTLSIYLLFLRLVGAERIKLG*