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SCNpilot_expt_1000_bf_scaffold_1493_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 11579..13846

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase alpha chain protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 755.0
  • Bit_score: 1353
  • Evalue 0.0
Formate dehydrogenase alpha chain protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP26_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 755.0
  • Bit_score: 1353
  • Evalue 0.0
Formate dehydrogenase alpha chain protein {ECO:0000313|EMBL:ACM29306.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 755.0
  • Bit_score: 1353
  • Evalue 0.0

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2268
ATGGCCGACGGAAAGCCACGATACAAGATCTATGATCATCCGGCAGGCGGATGGGGTGCTGCGGCTGCGACCGCAAAGGTGCTGATGGAGCAGAGCGTCATCACCAAGGGATCGCGCGCGCTTCTGGCGATGAACCAGCCGGGCGGGTTCAAATGCCCAAGCTGCGCCTTTCCCGATGCCGACTGCAAGAAGACGCTGGAATTCTGCGAAAACGGCGCCAAGGCGCTGGCGCATGAAGCGACCAGGTTCCGCGTCACGCCGGAATTCTTCCAGAAATACACTGTCACCGAGTTGATGGAGCAATCGGATTACTGGCTGGAGATGCAGGGCCGTCTGACCGAGCCGATGCGCTACGATGCGGCGAGCGACACATATGTCCCCTGCGGCTGGGCTGAAGCCTTCTCGATGATCGGCCGGCATCTGCGCTCGCTTTCGAGCCCGCACGAGGCGGAATTCTACACCTCGGGCCGCACGCCGAACGAGGCCGCCTTCCTCTATGCGATCTTCGTGCGGGAATTCGGCACCAACAATTTTCCCGATTGCTCGAACATGTGCCACGAACCGACCAGCCGCGGCCTGCCGCCGGCCATCGGCGTCGGCAAGGGCACGGTGGTGCTGGCGGATTTCGAGCATGCCGAGGCGATCTTCGTCATCGGCCAGAACACGGGTACCAATTCGCCGCGCATGATGACCAACCTGGTCGAGGCCCGCAAGCGCGGCGCGCCGATCGTCGCCGTCAATCCGATGCCGGAACGAGCTTTGATCCGCTTTACGGAGCCGCAGGATGTCATCCAGATGGCGACCTTCGGCTCGACGCCGATCGCCAGCGAATTCGTTCATATCAGGATCGGCGGCGATCTCGCGCTCATCAAGGGTATGATGAAAGTGATGTTCGAGCGCGAGGCGGCCGGCGAAGCGGTGCTCGACCACGATTTCATCGCCGAACACACGGTCGGCATCGAGGCGATCCGCGCCGATGCGATGGCGCAGGACTGGGCGGAGATCGTCCGCGTTTCAGGGCTCGATGAGGCGCAGATCCGCCGCTGCGCGGAAATCTACATCCGCTCGCGCGCGACGATCATCTGCTACGGCATGGGCCTGACGCAGCATCAGCAAGGCTCGCGCCTGCTGCAGCAGGTCTCGAACCTGCTTCTCCTGCGCGGCAATTACGGCAAGCCCGGCGCCGGCATCGCGCCCATTCGCGGCCATTCCAACGTGCAGGGCGACCGCACCGTCGGCATAGACGAAAAGCCGGCGCAGGATTATCTCGACCGCGTGCGCGACGTCTTCGGTTTCGAGCCGCCCCGCGAGCACGGCCACCATGCCGTCGAATCCGTCGCGGCGATGGAAAACGGCACGGCGAAGGTGTCTATCGGCATGGGCGGCAATTTCGTGCGCGCCATCCCGGATACCGAGCGTTCCTACGCCGCCATGCGCAAGCTCGCACTGACGGTCGGTATCGCCACCAAGCTCAATCGCGGCCATCTGGTGCATGGACGCGATGCGCTGATCCTGCCGGTCGTCGCCCGCTCGGAATGGATCAGGACGGCCCTCGGCGAGCAGTTCGTCACCATCGAGGATGCCATGTCGAACGTCACCGCCTCGCGCGGCGTCCTGGCGCCGGCCAGCCCGTACGTCATGCCGGAGGTGGAGATCGTTTGCCGGATGGCGATGGCGGCGCTGCCCAGCAGCAAGGTGCCGTGGGCCAGCTATATCGACGATTACGATCTCATCCGTGACAAGATCGCCGAGGTCTATCCGGAGATTTACACCGGTTTTTCCGAGCGGATCAAGAACCCGAAAGGCTTCCATCTCGATATCCCGCCGCGCCGGCGTGTCTGGCCGACGGAGAACGGCAAGGCGAATTTCCTGCCATTGCCCGGGCTGGAGGTGAACGACGTCGTCGACGATCCCGCCATGCTGCGGCTGGCGACGGTGCGTTCGCACGACCAGTTCAACACCACCATCTACAGCAACAACGACCGCTATCGTGGCGTCTATAACGACCGCATGGTGCTGTTCATGAATGCCGGGGACATCGCGGCGCGCGGCCTTGCCTCCGGCGCCCGGATCGCACTCGAAACCATCAGCACGGATGGGCTGGAGCGGCGCGTCGACGGGTTGACGATCCTCGATTATCCGATGCCACGCGGCGCGGTCGCCGGCTATTATCCGGAACTCAACCCCCTGCTGCCGCTCGATTATTATGACCGTATCAGCGGAACGCCGGCGGCGAAATCCATTCCGGTGCGCATCATCGCCGCATGA
PROTEIN sequence
Length: 756
MADGKPRYKIYDHPAGGWGAAAATAKVLMEQSVITKGSRALLAMNQPGGFKCPSCAFPDADCKKTLEFCENGAKALAHEATRFRVTPEFFQKYTVTELMEQSDYWLEMQGRLTEPMRYDAASDTYVPCGWAEAFSMIGRHLRSLSSPHEAEFYTSGRTPNEAAFLYAIFVREFGTNNFPDCSNMCHEPTSRGLPPAIGVGKGTVVLADFEHAEAIFVIGQNTGTNSPRMMTNLVEARKRGAPIVAVNPMPERALIRFTEPQDVIQMATFGSTPIASEFVHIRIGGDLALIKGMMKVMFEREAAGEAVLDHDFIAEHTVGIEAIRADAMAQDWAEIVRVSGLDEAQIRRCAEIYIRSRATIICYGMGLTQHQQGSRLLQQVSNLLLLRGNYGKPGAGIAPIRGHSNVQGDRTVGIDEKPAQDYLDRVRDVFGFEPPREHGHHAVESVAAMENGTAKVSIGMGGNFVRAIPDTERSYAAMRKLALTVGIATKLNRGHLVHGRDALILPVVARSEWIRTALGEQFVTIEDAMSNVTASRGVLAPASPYVMPEVEIVCRMAMAALPSSKVPWASYIDDYDLIRDKIAEVYPEIYTGFSERIKNPKGFHLDIPPRRRVWPTENGKANFLPLPGLEVNDVVDDPAMLRLATVRSHDQFNTTIYSNNDRYRGVYNDRMVLFMNAGDIAARGLASGARIALETISTDGLERRVDGLTILDYPMPRGAVAGYYPELNPLLPLDYYDRISGTPAAKSIPVRIIAA*