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SCNpilot_expt_1000_bf_scaffold_1493_curated_34

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 35440..35952

Top 3 Functional Annotations

Value Algorithm Source
citrate synthase 2; K01647 citrate synthase [EC:2.3.3.1] similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 171.0
  • Bit_score: 268
  • Evalue 1.30e-69
Citrate synthase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7D3E3_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 171.0
  • Bit_score: 268
  • Evalue 4.30e-69
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 171.0
  • Bit_score: 282
  • Evalue 3.10e-73

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
GTGACGCCGGATGCACGGCTCGGCCTTGCCGCTGATTTCCTGCACATGCTGCATGGCGCCGAAGTCGATGCCGGCAAGGTCAGGGCGCTCGATACCTATCTGGTGACGGTCGCCGATCACGGCCTGAATGCCTCGACGTTTACCGCGCGCGTCATCGCCTCCACCAAGGCGGGGTTGTTTTCCTCCGTCATCGGCGGGCTCTGCGCGCTGAAGGGACCGCTGCATGGCGGCGCGCCCGGGCCGGTGCTGGATATGCTCGATGCGATCGGCGATCAAAGCCGCATCCGGCCCTGGCTGGTCGATGCGCTGGGGCGTGGCGAACGGCTGATGGGTTTCGGGCACCGCATCTATCGCGTGCGCGATCCACGCGCCGACGTGCTCAAGCATGCGGTCGCCACTTTGCGGGACGGCGGTGGGCGTATCCGCTTCGCCGAAGCGGTCGAGGTCGAGGCGCTGGCGCTGCTGGCCGAGAAGAAGCCGTTGCGGCCGCTGCAGACCAATGTCGAATTCTAC
PROTEIN sequence
Length: 171
VTPDARLGLAADFLHMLHGAEVDAGKVRALDTYLVTVADHGLNASTFTARVIASTKAGLFSSVIGGLCALKGPLHGGAPGPVLDMLDAIGDQSRIRPWLVDALGRGERLMGFGHRIYRVRDPRADVLKHAVATLRDGGGRIRFAEAVEVEALALLAEKKPLRPLQTNVEFY