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SCNpilot_expt_1000_bf_scaffold_3799_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 19175..20407

Top 3 Functional Annotations

Value Algorithm Source
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 410.0
  • Bit_score: 766
  • Evalue 3.80e-219
2-oxoisovalerate dehydrogenase alpha subunit n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFR6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 410.0
  • Bit_score: 773
  • Evalue 1.30e-220
2-oxoisovalerate dehydrogenase subunit alpha {ECO:0000313|EMBL:CDN92944.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 410.0
  • Bit_score: 775
  • Evalue 2.80e-221

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGACCGAAACCACCCGATTGAGCCTGCATGTACCCGAGCCCGCCGTGCGGCCGGGCGGACAGCCGGATTTCTCCAATGTGAAAATTCCCAAGGCCGGCAGCGTGCCGCGCCCGGAGGTAGACGCGGCCCCGGATACGATCCGCGATCTCGCCTATTCGATCATCCGCGTGCTCAATCGCGAGGGCGAGGCAGTCGGCCCGTGGGCCGGGTCGCTGACCGACGCGCAATTGCTGACCGGCCTGCGCAACATGATGCGGCTGCGCGCCTTCGATGCCCGCATGCTGATGGCGCAGCGCCAGGGCAAGACCTCCTTTTACATGCAGCATCTCGGCGAAGAGGCGGTGAGCTGTGGTTTCCGCAAGGCGCTGGAAAAGGGTGACATGAATTTCCCGACCTATCGCCAGGCGGGACTGCTGATTTCCGACGACTATCCGCTGGTCACGATGATGAACCAGATTTTTTCCAACGAGCTCGATCCGCTGCATGGCCGGCAGATGCCGGTGCTGCATTCCTCAAAGGAACACGGCTTCTTCACCGTCTCCGGCAATCTCGCCACGCAATATGTGCAGGCGGTCGGCTGGGCGATGGCTTCGGCGATCAAGGGCGATACCCGCATTGCGGCTGCCTGGATCGGCGACGGCTCGACGGCGGAATCGGATTTTCACTCGGCGCTGGTCTTCGCCTCCACCTACAAGGCGCCGGTCATCCTCAACATCGTCAACAATCAATGGGCGATCTCGACCTTCCAGGGCATCGCGCGCGGCGGTTCGGGCACGTTTGCGGCGCGCGGCCTCGGCTTCGGTATCCCGGCGCTGCGCGTCGACGGCAATGATTATCTTGCCGTCCATGCGGTGGCGCGCTGGGCAGCGGAGCGCGCTCGGCGCAATCTCGGGCCGACGCTGATCGAATACGTCACCTACCGGGTCGGCGCCCATTCCAGCTCCGACGATCCCGGCGCCTATCGCCCCAAGACCGAATCCGAGGCCTGGCCGCTCGGCGATCCCGTGCTGCGGCTGAAGAAGCACCTGATCCTGCGCGGCGTCTGGTCCGAGGAGCGGCACGCCCAGGCCGAGGCTGAAATCATGGACGAGGTGATCGAGGCGCAGCGCGAGGCCGAGAGCCACGGCACGCTGCATGCCGGCGGCAAACCTTCCGTCCGCGATATTTTCGAAGGCGTCTATGCTGAAATGCCGCCGCATATCCGCCGCCAGCGCCAGAAGGCAGGATATTGA
PROTEIN sequence
Length: 411
MTETTRLSLHVPEPAVRPGGQPDFSNVKIPKAGSVPRPEVDAAPDTIRDLAYSIIRVLNREGEAVGPWAGSLTDAQLLTGLRNMMRLRAFDARMLMAQRQGKTSFYMQHLGEEAVSCGFRKALEKGDMNFPTYRQAGLLISDDYPLVTMMNQIFSNELDPLHGRQMPVLHSSKEHGFFTVSGNLATQYVQAVGWAMASAIKGDTRIAAAWIGDGSTAESDFHSALVFASTYKAPVILNIVNNQWAISTFQGIARGGSGTFAARGLGFGIPALRVDGNDYLAVHAVARWAAERARRNLGPTLIEYVTYRVGAHSSSDDPGAYRPKTESEAWPLGDPVLRLKKHLILRGVWSEERHAQAEAEIMDEVIEAQREAESHGTLHAGGKPSVRDIFEGVYAEMPPHIRRQRQKAGY*