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SCNpilot_expt_1000_bf_scaffold_10208_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1694..2095)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 133.0
  • Bit_score: 244
  • Evalue 7.30e-62
plasmid stabilization protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003788D64 similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 132.0
  • Bit_score: 245
  • Evalue 3.00e-62
hypothetical protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 132.0
  • Bit_score: 241
  • Evalue 1.40e-61

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTACCTCGTTGACACCAACATCGTTTCAGAAGCCCGACGCGGCACTGCAGAGGCAGTGTCATGGTTGCGATCCGTCAATCCTCTGAGCGTTTACCTGAGCGCCCTGACGTTGGGTGAGGTCATGCGCGGCATTGCCCTGAAGCAGAAAGCGGACCCGCGCGCGGCAGCTCACCTCGCTGAATGGTTACGCAAACTGCGCCATGATCACCTCGACCGCATCCTGCCGGTCACCGACGAAATCTCTGTCGAATGGGGGCGCATTGCCGCGATCCGTCCGCGTGGTGATGTCGATGGCCTGATCGCCGCTACCGCGATCGTCCACGACCTGATCCTTGTCACGCGCAACGTCAAGGATTTCGAAGACACGGATGCTACGGTGATCAATCCATGGGAGATGTAG
PROTEIN sequence
Length: 134
MYLVDTNIVSEARRGTAEAVSWLRSVNPLSVYLSALTLGEVMRGIALKQKADPRAAAHLAEWLRKLRHDHLDRILPVTDEISVEWGRIAAIRPRGDVDGLIAATAIVHDLILVTRNVKDFEDTDATVINPWEM*