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SCNpilot_expt_1000_bf_scaffold_3492_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(519..1790)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000256|SAAS:SAAS00019792};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 421.0
  • Bit_score: 703
  • Evalue 2.40e-199
dinP; DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 416.0
  • Bit_score: 701
  • Evalue 2.00e-199
DNA polymerase IV n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HJD8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 415.0
  • Bit_score: 701
  • Evalue 3.70e-199

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGCCGGGCTTCTGCCGGGATTGCCTCCGGGATGCACCCACCGAGGAGCGGCGTTGCCGCGCCTGCGGCAGCCCGCGGCTGGTGCGCCATGCGGAACTGCTGGACCTCACCATCGCCCATATCGATTGCGACGCCTTTTATGCCGCGGTGGAAAAGCGCGACAATCCCGAGCTTGCCGACAAGCCACTGATCATTGGTGGTGGAAAACGCGGCGTCGTCTCCACCGCCTGCTACATCGCCCGCATTCATGGCGTCCGCTCGGCAATGCCGATGTTCAAGGCGCTGGAGGCCTGCCCGCAGGCCGTGGTGCTTCCGCCGAACATGGAGAAATACGTCACCGTGGGACGCCAGGTGCGGGCGCTGATGCAGGAATTGACGCCGCTGGTACAGCCGCTCTCCATCGACGAGGCCTTTCTCGATCTCTCCGGCACCGAGCGGCTGCATCATGCGCCGCCGGCACTGACGCTCGCCCGCTTCGCCCGCCGCATCGAGGCGGAAATCGGAATCAGCGTTTCAGTCGGTCTCTCCTATTGCAAGTTCCTCGCCAAGGTCGCCTCCGATCTGCAGAAGCCGCGTGGCTTCTCGGTGATCGGCCGCGAAGAGGCCCTCACCTTCCTCGCCGCCCGGCCGGTCACTACCATCTGGGGCGTCGGCAAGGCCTTTGCGGCGACGCTGGAGAGCGACGGGATCCGTATGATCAGCCAGCTCCAGACGATGGAGGAAGGCGACCTGATGCGCCGCTACGGCACCATGGGCCAACGCCTCTACCGCCTGTCGCGCGGTATCGACGACCGCGACGTCCATCCCAACGATGCCGCCAAAAGCGTCTCGGCTGAAACCACCTTCTTCGACGACATCCACCGCCATGACGATCTCGTGCCAATCCTGCGCGATCTCTCGGAAAAAGTGGCGCGGCGGATGAAGAAAAGCGCCGTCGCCGGCCATACCGTCGTGCTGAAGCTGAAGACGGCGGATTTCAGGATTCGCACCCGCAACCGGCGCCTCGCCGACCCGACCATGCTGGCTGACCGCATTTTTCGCACCGGGCTGACGCTGCTCGAAAAGGAAACGGACGGCACGAAATTCCGCCTGCTCGGCATCGGCGTCACCGATCTGTGCGATCCCGGCCGCGCCGATCCGCCCGATCTGGTCGACGCGCAGGCAACGCGGCGGGCGGCGGCGGAAGCGGCAATCGACAAGCTGCGCGACAAGTTCGGCAAGAAAAGCGTCGAAACCGGCTATACGTTTCGCCCGAACACATCCGATCAATAG
PROTEIN sequence
Length: 424
MPGFCRDCLRDAPTEERRCRACGSPRLVRHAELLDLTIAHIDCDAFYAAVEKRDNPELADKPLIIGGGKRGVVSTACYIARIHGVRSAMPMFKALEACPQAVVLPPNMEKYVTVGRQVRALMQELTPLVQPLSIDEAFLDLSGTERLHHAPPALTLARFARRIEAEIGISVSVGLSYCKFLAKVASDLQKPRGFSVIGREEALTFLAARPVTTIWGVGKAFAATLESDGIRMISQLQTMEEGDLMRRYGTMGQRLYRLSRGIDDRDVHPNDAAKSVSAETTFFDDIHRHDDLVPILRDLSEKVARRMKKSAVAGHTVVLKLKTADFRIRTRNRRLADPTMLADRIFRTGLTLLEKETDGTKFRLLGIGVTDLCDPGRADPPDLVDAQATRRAAAEAAIDKLRDKFGKKSVETGYTFRPNTSDQ*