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SCNpilot_expt_1000_bf_scaffold_3918_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7337..8101)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein DppC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL83_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 254.0
  • Bit_score: 472
  • Evalue 2.90e-130
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR81668.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 254.0
  • Bit_score: 472
  • Evalue 4.10e-130
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2 similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 252.0
  • Bit_score: 355
  • Evalue 1.60e-95

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
CTGCTGCTGTTCGTGGCGATCTTCGGTCCGTGGCTTGCGCCTTACGATCCCCTGAAGCTCGATCTGCTCGCCCGCCTCAAGGGGCCGTCGCCAGATCACCTGCTCGGCGCCGACGAATTCGGCCGCGATATTCTCAGCCGGCTGATCTATGGCGCGCGCACCAGCGCCTGGATCGCCTTTTCCACTGTTATCTTCGCCATCGTCTTCGGCACTATCTTCGGCATTCTCGCCGGTTTCCTGCGCGGCTGGACGGATCGCCTGCTGATGATGGTCAACGATGCGCTGCTTGCCTTTCCCGGCCTGCTGCTGGCATTGGGTTTCATGGCCGTGTTCGGCGCCAGTCGAAACGGCATCATCGTCGCGCTCGGCATCGCCTATATGCCGGTCGCGGTCCGCGTCGTGCGCGGCACGGTCCTCTCGATCCGCGAGCGGGAATATGTCGAGGCGTCCCGGGTGATGGGCAATAGCGAGATCGTCACCATGTTGCGGCATGTGCTGCCGAATTGCGTGGCGCCGGTCATGGTGCTGGCGACGACGATGTTCGGCTGGGTGGTGCTGTCGGAAAGCGCCCTGTCCTTCCTCGGGCTTGGCGTACCGCCGCCGGCGCCGAGTTGGGGCAATATGCTCTCCACCGGCCGGCCTTACATCAATCAGGCGCCGCATATCGTCATTTTGCCCGGCCTCTGCATCTCGATTGCGCTGCTCGGCGTGAATCTCCTCGGCGATGCGGTGCGCGACTGGCTCGACCCGAAGATGCAGGATTGA
PROTEIN sequence
Length: 255
LLLFVAIFGPWLAPYDPLKLDLLARLKGPSPDHLLGADEFGRDILSRLIYGARTSAWIAFSTVIFAIVFGTIFGILAGFLRGWTDRLLMMVNDALLAFPGLLLALGFMAVFGASRNGIIVALGIAYMPVAVRVVRGTVLSIREREYVEASRVMGNSEIVTMLRHVLPNCVAPVMVLATTMFGWVVLSESALSFLGLGVPPPAPSWGNMLSTGRPYINQAPHIVILPGLCISIALLGVNLLGDAVRDWLDPKMQD*