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SCNpilot_expt_1000_bf_scaffold_2046_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 12682..13773

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline 2-epimerase 1 {ECO:0000303|PubMed:24980702}; Short=4Hyp 2-epimerase 1;; Short=4HypE 1 {ECO:0000303|PubMed:24980702};; EC=5.1.1.8 {ECO:0000269|PubMed:24980702};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 345.0
  • Bit_score: 598
  • Evalue 7.00e-168
Proline racemase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J8G8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 345.0
  • Bit_score: 598
  • Evalue 5.00e-168
proline racemase similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 345.0
  • Bit_score: 598
  • Evalue 1.60e-168

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGCCGGCGGCCGGCGCCGCCCTGACGGGAGAACGAAGGATGAGATGGAAACGCACGATCCAGCTTCTGGATGTCCATGCCGAGGGTGAGATCGGCCGGGTGGCGATCGGCGGCGTGCCGAAAATTCCCGGCAATACCGTGGCGGAACAACTGCACTGGCTGAACACCGATCCGAAGGGCGATGCGTTGCGTCGCTTCCTGGTGCTGGAGCCGCGCGGCACGCCGATGGGTTCGGTCAACCTGCTCTTGCCGCCCAAGCATCCCGATGCCGATACCGCCTTCGTCATCCTGCAGCCGGACCAGGCTCATGCCAGCTCCGGCTCGAATTCGATCTGCGCCACCACCGCGCTGCTCGAGGCCGGCATCGTCGAGATGAAGGAGCCGGAAACCGTGGTGACGCTGGAAACCGCCGCCGGCCTGGTGAAGGCGGTTGCAACCTGCCGCGACGGGCGCTGCGAAAAGGTCAAGCTGACGATGGTTCCCGCCTTCGTCCACCAGCTCGATGTCGAGCTCGACACGCCCGAATGGGGCAGGATCACCGGCGATATCTGCTATGGCGGCATTTTCTACCTGCTGGTCGATGCCGATCAGGTGGGCCTGACCATCGCCCCCAGCCATGCTGCCGCGCTGGTCAAGGCCGGCATGATCCTCAAGGAGATCGTCAACCGCACCATCTCGGTCGTGCATCCCGAGATTCCGGCGATTTCCGGCGTCGCCTACGTGATGTTCCGTGGCCGTGACGAAGATGGTTCCATGCGCACCTGCACGACGATGTGGCCGGGCCGCGTCGACCGCTCGCCCTGCGGCACCGGCAGTTCCGCCAATCTGGCGACGCTGCATGCGCGCGGCCAGGCGACGGTCGGGGATACCCTGATTTCGCGCTCGATCATCGGCTCGGAATTCGAGGTCGGGCTCTCGGCCGAAACCACGGTCGCCGGCAAGCCGGCGATCATCCCGACCATCGCCGGCCGCGGCTTCACCTTCGGCCTGCATCAGGTGGCGCTCGACCCGGCCGATCCCATGGCGGAAGGATTTGCGCTGACCGACGTCTGGGGTCCCTCGGCGGGCGACATCCCCGAGCCGCGCAAGTAA
PROTEIN sequence
Length: 364
MPAAGAALTGERRMRWKRTIQLLDVHAEGEIGRVAIGGVPKIPGNTVAEQLHWLNTDPKGDALRRFLVLEPRGTPMGSVNLLLPPKHPDADTAFVILQPDQAHASSGSNSICATTALLEAGIVEMKEPETVVTLETAAGLVKAVATCRDGRCEKVKLTMVPAFVHQLDVELDTPEWGRITGDICYGGIFYLLVDADQVGLTIAPSHAAALVKAGMILKEIVNRTISVVHPEIPAISGVAYVMFRGRDEDGSMRTCTTMWPGRVDRSPCGTGSSANLATLHARGQATVGDTLISRSIIGSEFEVGLSAETTVAGKPAIIPTIAGRGFTFGLHQVALDPADPMAEGFALTDVWGPSAGDIPEPRK*