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SCNpilot_expt_1000_bf_scaffold_2046_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 29658..30992

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC and chase sensor(S) n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC16_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 431.0
  • Bit_score: 522
  • Evalue 5.60e-145
Diguanylate cyclase/phosphodiesterase with PAS/PAC and chase sensor(S) {ECO:0000313|EMBL:EYR78744.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 431.0
  • Bit_score: 522
  • Evalue 7.80e-145
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 433.0
  • Bit_score: 519
  • Evalue 8.70e-145

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGGAGCACAATTCGCTGCATGATGCGTTGACCAAGCTGCCGAACCGCCGCTATCTCGACCAGATCCTGGCCCAGAAATCGGCGGCGCCGAACGGCCGGGCGACGCTGACCGTGCTGCATATCGACCTCGACCGCTTCAAGGAAATCAACGACACGCTCGGTCATGCCGCCGGCGACGAGATTCTCAAGCATACCGCCGAGGTGCTGCGCGCCAGCCTCCGTCCGGAGGATTTCGTCGCCCGCATCGGCGGCGACGAATTCGTCATCATTTCCGATATGCCCGAGGCCGGCGGCTATTACCAGCGCCTTTCCGACCGCATCATCGAGGCGCTGGGCCAGCCGATCCTGTTCGAGGGCCACGAGTGCCGCGCCGGGGCCAGCATCGGCATCGCGGTGCGCACCGATGCCTGCGAGCGCAATGACGAACTGCTGATCAACGCCGACATCGCGCTCTATGAGGCCAAGCGACGCGGGCGCAATCGCTGCGAGTTCTTCACCGACATGCTGCGTTCCTCGGTCGTTCACACCAAGCAGACAGCCGACGAAATTCTGCGCGGGCTGGAGGCCGGCGAATTCCTCGCCTACTACCAGCCGCAATTCGACGCCCATACGCTGGAGATCTCCGGTGTCGAGGCGCTGGTGCGCTGGGATCATCCCACCAAGGGCATTCTGCCGCCGGCCGCCTTCCTGAAGATCGCCGAAAGCCTGAACGTCGTCGGTACGCTCGACCAGATCGTTCTCGAACAGGCGCTGGTGCATTTCAACCAGTGGACGGCGCATGATCTCGCCATCCCCAAGGTCTCGGTCAACATCTCGGCGCAACGGCTGCACAATCCGCATCTCTACGAGCGGGTCGCGGCGCTCGGCCTGCGTCCCGGCTCGGTCTGCTTCGAATTGCTGGAGTCCATTTCCTTCGACGAGCATGACGAGACGCTGATCGGCAACATCCACAAGCTGAAGTCGCTGGGCATCGAATTCGAGATCGACGATTTCGGCACCGGTCATGCCTCGATCATCAGTCTGCTGAAGTTGACGCCGCGCCGGCTGAAGATCGATCGGCAGCTCATCAAGCCGATCCTGTCGTCTTCCACCGAGCGGCAACTGGTCGAGTCGATCATCGACATCGGCAAGGCCTGCGCCATCGAGATCGTCGCCGAAGGCGTCGAGACGATGGAACATGCCGCCATGCTGCGCGACATGGGCTGCGATCATCTGCAGGGCTATGCCTTCGCCCGCCCGATGAGTGCGGCCGATTTCCTTGATTTCGCCCACCGCCGCGCCTGGTTTGCCGCTTATGAGAAGGCCGCCGGCCCGCCACGCCTGCAATGGGCCTGA
PROTEIN sequence
Length: 445
MEHNSLHDALTKLPNRRYLDQILAQKSAAPNGRATLTVLHIDLDRFKEINDTLGHAAGDEILKHTAEVLRASLRPEDFVARIGGDEFVIISDMPEAGGYYQRLSDRIIEALGQPILFEGHECRAGASIGIAVRTDACERNDELLINADIALYEAKRRGRNRCEFFTDMLRSSVVHTKQTADEILRGLEAGEFLAYYQPQFDAHTLEISGVEALVRWDHPTKGILPPAAFLKIAESLNVVGTLDQIVLEQALVHFNQWTAHDLAIPKVSVNISAQRLHNPHLYERVAALGLRPGSVCFELLESISFDEHDETLIGNIHKLKSLGIEFEIDDFGTGHASIISLLKLTPRRLKIDRQLIKPILSSSTERQLVESIIDIGKACAIEIVAEGVETMEHAAMLRDMGCDHLQGYAFARPMSAADFLDFAHRRAWFAAYEKAAGPPRLQWA*