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SCNpilot_expt_1000_bf_scaffold_1951_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 8231..8635

Top 3 Functional Annotations

Value Algorithm Source
Pilus subunit transmembrane protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VT64_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 124.0
  • Bit_score: 194
  • Evalue 6.20e-47
Pilus subunit transmembrane protein {ECO:0000313|EMBL:EJZ21971.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 124.0
  • Bit_score: 194
  • Evalue 8.70e-47
pilQ; pilus subunit transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 124.0
  • Bit_score: 193
  • Evalue 4.30e-47

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGTTGTCACGCTGCGTTGCCGCAACGATCGCTATTTTCGCCACGGCAGGCGCCGCGCGCGCCGATGACGAGATGATGCGTGTCTATATGGACCACGCCCGCGTGCTCAGGCTCGACCGCCCGGTCAGCAAGGTCATCGTCGGCAATTCCCAGGTCGCCGACGCCACGGTCGCCGATTCCCATACCATCGTCCTGACCGGCCGCAGCTTCGGCACCACCAATCTGGTGCTCCTCGACGCCGACGGCAATGCCATTGTCGACGAGCGCATCCTGGTATCGATCGACGAAGGCAGCACGGTGCGCGTCTTCCGGCGCACGGAGCGCTCGGTCCTGTCCTGCACGCCCAATTGCGAGCAGCATGCCACGCACGACAAGGCCGCCGAGTCGGGCGGCGCCGCGCCGTAG
PROTEIN sequence
Length: 135
MLSRCVAATIAIFATAGAARADDEMMRVYMDHARVLRLDRPVSKVIVGNSQVADATVADSHTIVLTGRSFGTTNLVLLDADGNAIVDERILVSIDEGSTVRVFRRTERSVLSCTPNCEQHATHDKAAESGGAAP*