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SCNpilot_expt_1000_bf_scaffold_2911_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(24301..26571)

Top 3 Functional Annotations

Value Algorithm Source
type I secretion system ATPase, PrtD (EC:3.6.3.25) similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 763.0
  • Bit_score: 1103
  • Evalue 0.0
Putative ATP-binding component of ABC transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UG94_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 761.0
  • Bit_score: 1111
  • Evalue 0.0
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:EGP54749.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 761.0
  • Bit_score: 1111
  • Evalue 0.0

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2271
ATGAATTACGTGTTGAGAGGGACGGTTTCCTGGCAACCGCCCATGCGGCAGGACGCAGTCCGCCGGGGCGGCTCCGAAGGCGATGTGATGGATGCCTGCATCCAGGCCATCAATGACGCCGTCGAGGATTTTCTGACGACATCGCTGGCCAAACCGCCGCAAGATACCGACCTGCAAAAAGAAATTCAGGATACCGCCCCGCAATCAACCGCACTGGAAAGCGCTCCCCGGCTTGCCGAGCCGGCGATCCAGACAACCGCTCCCCTGATACCGGTTCCGGAAACCGTTGCCAAAGCGCCTGTCGCGCCTTCCAATCCCGCAACGGCGCGTGAAACGCCTGCTTCTCCCACCGATCCTGCCGCCCGCGTCGAGCCCGTTCCGAAGCAGGACCTGCCCTTCGTCAAGACCATCGACAGCGACAACGGGCCCGTGCGCGCCAATGAACGTCGCCCCTCGACAGGCGGCGGCGGCAATGGCCGCACGCCCGATTCCGGCGGTGGCGGCGGTGGCGGCGGCAATCCGAACCAGCAGGGCTTCCACAAGCGTAGCGAACCGGTCAACTTCGCCCGCAGCCTGCAGCAGGCGATGGCCGCCATTCGCCGCAACATGGCGGTGGTGATGATCTTCACCATCGCCATCAACGTGCTGCTGCTGGCGATCCCGATCTATTTGTTCCAGATTTCCGACCGTGTGCTGACCAGCCGCTCGATGGACACGCTGGTCATGTTGACGATCGCCGTCATCGGCGCTGTCCTGCTGCAGGCGTTCATGGATTCGGTGCGCCGCTTCATCCTGATGCGCACGGCAGTAGAACTGGAGGTTCAGCTCGGCGCACCGGTTCTGTCGGCGGCGGCGCGCGCCTCGCTGCACGGCAACGGCAAGGATTACCAGACGCTGCAGGATCTGCAGCAATTGCGTGCCTTCATCACCTCCGGCACGCTGATCGCCTTCCTCGATGCGCCATTGATGCCGCTGTTCATCGTCGTCGTCTACCTGGTGCATCCGCATCTGGGCATCATCATCATGGTGTGCTGCGTCACGCTGTTTCTCATCGCCTGGCTGAACCAGCGCTTCACCGCAAGGCAGTTCTCGGAGGCCAGCGGTTATGCCAGCCGCGCCAATTTCCATCTCGATTCGATGACCCGAAATTCGCAGATCATCAACGCCTTGGCGATGATACCGGAAGCCGTGAGGATGTGGGGGCAGGAAACGGCCGGTTCGTTGAAGGCTCATGTCCAGGCCCAGGATCGCAACATCATCTTTTCGGGTATCTCCAAGGGCTGCCGCATGGTCGCGCAGATCGCCCTGCTCGGCTGGGGCGCGCATTTGTCGCTCGCCGGCGAATTGACCGGTGGGATGGTGATCGCCGCCTCGATCATCTCCGGTCGCGCGCTGGCGCCGATCGAAGGCGCCATCGAGGGCTGGAACCAGTTCAACCGCTCCGCCGCCGCTTATGGCCGCATCAAGCAGTTGCTGCTCGGCTCGCCGCTGAACTTCGCCCGCCTGCGCCTGCCCAACCCGGAAGGACGGCTGGATGTGGAGCGCGTGCTGTTCGTACCGCCGCCGCAGAAGCGCGTGATCCTCAACGGCATTTCCTTCTCGCTGAAGAAAGGCGAGTCGCTGGCGATCATCGGCAATTCCGGTTCCGGCAAGACGACGCTCGGCAAGATGCTGGTCGGCTCGATCATGCCGACCTCGGGCAATGTCCGCCTCGACCTGATGGATCTGCGCAACTGGGACCAGCGTCAGTTCGGCGAAAGCATCGGCTACCTGCCGCAGGACGTGCAGCTTTTCCCGGGTACGATCAAGGCGAACATTTCACGCATGCGCGACGATATCGAGGACCGGCAGATCTTCGAGGCCGCGGGGCTGGCCGATGTGCACGAGCTGATCGCCGGCCTGCCGCAGGGATACGAGACCATCGTCACCGCCGATGGCTCGCCGCTTTCGGGCGGCCAGAAGCAGCGTATTGCGCTGGCCCGCGCCTTCTTCGGCGATCCGAAATTCGTGGTGCTCGACGAGCCCAACTCCAATCTCGACACGCAAGGGGAGGCGGCGCTCGCCCGCGCCCTGATGCATGCCAAGAAGCAGGGTATCACCACGGTCACGATCACCCAGCGCCCAGCGCTCCTGCAATGCGTCGACAAGATCCTGGTGCTGAAGGATGGCACCGTCGGCATGTTCGGCGAGCGGATGGAAGTGTTGAAGGCGCTTTCGGGCAATCGCGGACAGCAGCAGCAGGGCGGCGCAGAACCGCGCATAGGGGGTTGA
PROTEIN sequence
Length: 757
MNYVLRGTVSWQPPMRQDAVRRGGSEGDVMDACIQAINDAVEDFLTTSLAKPPQDTDLQKEIQDTAPQSTALESAPRLAEPAIQTTAPLIPVPETVAKAPVAPSNPATARETPASPTDPAARVEPVPKQDLPFVKTIDSDNGPVRANERRPSTGGGGNGRTPDSGGGGGGGGNPNQQGFHKRSEPVNFARSLQQAMAAIRRNMAVVMIFTIAINVLLLAIPIYLFQISDRVLTSRSMDTLVMLTIAVIGAVLLQAFMDSVRRFILMRTAVELEVQLGAPVLSAAARASLHGNGKDYQTLQDLQQLRAFITSGTLIAFLDAPLMPLFIVVVYLVHPHLGIIIMVCCVTLFLIAWLNQRFTARQFSEASGYASRANFHLDSMTRNSQIINALAMIPEAVRMWGQETAGSLKAHVQAQDRNIIFSGISKGCRMVAQIALLGWGAHLSLAGELTGGMVIAASIISGRALAPIEGAIEGWNQFNRSAAAYGRIKQLLLGSPLNFARLRLPNPEGRLDVERVLFVPPPQKRVILNGISFSLKKGESLAIIGNSGSGKTTLGKMLVGSIMPTSGNVRLDLMDLRNWDQRQFGESIGYLPQDVQLFPGTIKANISRMRDDIEDRQIFEAAGLADVHELIAGLPQGYETIVTADGSPLSGGQKQRIALARAFFGDPKFVVLDEPNSNLDTQGEAALARALMHAKKQGITTVTITQRPALLQCVDKILVLKDGTVGMFGERMEVLKALSGNRGQQQQGGAEPRIGG*