ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3641_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2773..6288)

Top 3 Functional Annotations

Value Algorithm Source
Helicase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJM6_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 999.99
  • Bit_score: 2215
  • Evalue 0.0
RNA helicase {ECO:0000313|EMBL:KIC60498.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 999.99
  • Bit_score: 2225
  • Evalue 0.0
helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 999.99
  • Bit_score: 2215
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas nasdae → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3516
ATGGTGGCACGGCTTGAGGAGGTAAAGAACGGCGCATCCGTGCGGGGCGTGGCCTCGGCGCAGGCCGTGCATGTCGTTTCCGTCGACTGGATCGGTGATCAGGCGATCAGCGTCGTTTACCGCGATCACAATGGCACGGTAGCCGAGGCTATTCTTTACCGGGACGACGAACATCGTCTTGAAGTCGAGCAGAACGGGCGGCCCTGGTCTTTCGACGCCGATGGTGCCCTGCTGCGCCTGGTGACAGAAGCTAACCGCATCAAGCTGGCGCATTATTTCGACCCGTACTTGGCGATCCACACGAGTCTGGTCGATCCGCTGCCGCATCAGATTTCTGCCGTCTATGGCGAGATGCTGCCGCGCCAGCCGCTGCGCTTCCTGCTTGCCGACGATCCCGGCGCCGGCAAAACGATCATGGCCGGACTATTGATGAAGGAGCTGATCGCTCGCAGCGATCTTGAGCGGTGTCTCGTTGTCGCGCCGGGCAGCCTGGTCGAGCAATGGCAGGACGAACTCGGCCAGAAGTTCAATCTCGAATTTGACATCCTCTCCCGCGACATGATCGAGAACTCGCGCTCGGGTAATCCGTTCAGCGACCGTGATCGGCTGATCGTCCGCCTCGACGTGCTGGCGCGCAACGAGGAGCTTCAGGAGAAGCTCTCGAGCGCGCGCGAATGGGACTTGATCATCTGCGATGAAGCCCACCGCATGTCTGCCACCTATTTCGGCGGTGAGGTCAAATATACGCGGCGCTATCAGGTCGGTCAGAAGCTCGGCCAGGTCTGTCGCCACCTGCTGTTGATGTCGGCGACACCGCACAACGGCAAGGAAGAGGATTTCCAGCTCTTCATGGCGCTTCTCGACGGCGATCGGTTCGAGGGCCGTTTCCGCGATGGTGTCCACTATGCCGACACCGAAGACATGATGCGGCGGCTGACCAAGGAGGAACTGCTCAAGTTCGATGGCCGACCGCTGTTCCCCGAGCGGCGGGCACGCACCGTCAAATATCGGCTCTCGGGAGGGGAGGCTGCACTTTACACCGCTGTCACCGAGTATGTGCGCACCGAGATGAACCGCGTGCAGCGGTTCGCGGAAGGTGACGGGAAGAAGCGCAACAATGTCGGCTTCGCCTTGCAGATTCTCCAGCGGCGCCTCGCGTCGTCACCCGCCGCCATCTACCAGTCGCTCAAGCGCCGCCGGGAACGGCTGGAAAACGAGCTGGGCGAAGCGCGCCTAGCCGCCAAGGGGCGCCGGGCCGGCGCATCCGAACCGGCGATCAACGCCGACATGCTGCGGAACATCGAGGAGTATGGCCAGGAGGAGATTGACGAGCTTGAGGATCTGATCTCGACAGGCGCGACGACGGCCGAGACGGTCGAGCAACTCGCCCTGGAAGTCGAGACTCTGAAGGGCCTGGAGACGATGGCGCTCGGCGTGCTGCGCTCCGGCGTCGATACGAAGTGGAGCCAACTCAATCGTATTCTCGACGACGATTTGATGGTCGATGCGGCCGGCAATCGCCGCAAGCTGATTATCTTCACCGAGCCCAAGGACACGCTGCACTACCTGCTCGACAAGGTGCGTGCGCGGCTCGGCAACCCCGAGGCCGTAGAGGTGATCCATGGCGGCGTGTCGCGCGAAGAGCGGCGGAAGGTCGTCGAGCGCTTCATGCAGGACAAGGACATGCTGGTCCTGATCGCCAACGATGCGGCAGGTGAAGGCGTGAACCTCCAGCGCGGCCATCTCATGGTCAATTACGACCTGCCGTGGAACCCGAACAAGATCGAGCAGCGGTTCGGCCGTATCCATCGCATCGGCCAGACCGAGGTTTGCCATCTTTGGAATCTCGTCGCGGCCGATACCCGCGAGGGTGAGGTTTATGCGCGTCTGCTCGAAAAACTGGAAGCTGCGCGCGAGGCGCTGGGCGGCCGTGTTTATGACGTGCTTGGCGAATTGTTCGACGGCGTGGCGCTCAAGGATTTGCTGTTCGAGGCGATCCAGTATGGCGAGAAGGAAGAGGTCAAGGCACGCCTGTTCCAGCAGGTGGATGGCGCCGTCGATCAGGCGAACCTGCTCGAACTGCTGCGCCGCCGCGCGCTGACCAACGACACCATGCCGGAGGCCAAGGTCGAGGAACTGCGGCTCGAAATGGAGCGCGCCGAGGCGCTGCGCCTACAGCCGCACCATATTCAGAGCTTCTTCGTCGAGGCGTTCCAGCATCTGGGCGGCCGGATCAAGCGCCGCGAGGAAGGGCGTTGGGAGGTCACTCATGTCCCGGTGCGTATCCGCGAGCGGGATCGCCAGATCGGGACTGGCGCGCCGCTTCAGACCCAGTATGAGCGGATCTGCTTCGAGAAGGACAAGATCAACCAGCAGCCGGTCGCCGCCTTCGTTTGCCCCGGCCATCCGCTGCTCGAAGCGGTGATCAGCCTGATCCGCGAGCAGTATGAGCAGATCATGCGGCAGGGCGCGATCCTGGTCGACGACACCGACGCCGGCGACGCGCTGTCGGCGATCTTCCTGCTGGAGCACACGGTCCAGGACGGACGCGTCACCAGCGCCGGCAAGCCGCATGTGATTTCGCAGCGGCTCCAGTTCGCTGCCATCGACAAGGCCGGGAACATCGTCAACGCCGGCATCGCGCCGCATTTGAACCTTCGGCCCGCCAAGCCGGAGGAGGTCGCCAGCGTGCGGGACCTGCTCGACGAGAGCTGGCTGACCACCGATCTGGAGAAGGCCGCGATCCGTTTTGCGACGGTCGAGTTGGCCCAGGGCCATGTCGCCGAGGTCAAGGCGCGGCGCCTGCCCGAGATCGAGAAGGTCGAGCAGGAGGTTCGCGCGCGGCTCAAGAAGGAGATCAACTACTGGGACTCGCGCGCCTTCGAGCTGAAGGAAGAGGAGCGGGCCGGCAAGAAGACGCGGGTGAACTGGCAGAACGCTCAGCGCCGGGCCGAAGATCTGGCGGATCGGCAGAAGCGCCGCATGGACCAGCTTGAGCGGGAGCGGTTCATCTCGTCGCAGCCGCCGCGTGCGCGGGGCGGCATGGTCGTCATTCCGCGCGGCCTGCTGGAGGCACGCCAAGTGCCGGACACGGCGGCGGGCGTTCCGAGCCACTTCTCCGAAGATCCCGAAGCACGCCGTCGGATCGAGCTTGCGGCGATGGAAGCCGTCATGGCGGCCGAGCGGGCGCTCGGGAACGAGCCGGCCGACGTCTCCGCTCAGAAAATCGGTTACGACATCGCCTCCCACGATCCGAAATCGGGGCATCTGCGCTTCATAGAGGTCAAGGGGCGCATCGACGGCGCAGACAGCGTGATGGTCACGCGGCAGGAGGTCATCACCTCCCTGCATGAGCCGGAGAAGTTCATTCTCGCCATCGTTTCGGTCACCGGCGGTCGCGCGCACACGCCTCGGTATGTGCGCGGCCCGCTTGTTGAGCGGGAACCATCATTCCTCGAAACCGCAATTCAGTTTGACTTGAAGCGGTTGCTGGAACGGACTTCTGAACCAGGGTGA
PROTEIN sequence
Length: 1172
MVARLEEVKNGASVRGVASAQAVHVVSVDWIGDQAISVVYRDHNGTVAEAILYRDDEHRLEVEQNGRPWSFDADGALLRLVTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLPRQPLRFLLADDPGAGKTIMAGLLMKELIARSDLERCLVVAPGSLVEQWQDELGQKFNLEFDILSRDMIENSRSGNPFSDRDRLIVRLDVLARNEELQEKLSSAREWDLIICDEAHRMSATYFGGEVKYTRRYQVGQKLGQVCRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGVHYADTEDMMRRLTKEELLKFDGRPLFPERRARTVKYRLSGGEAALYTAVTEYVRTEMNRVQRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRRERLENELGEARLAAKGRRAGASEPAINADMLRNIEEYGQEEIDELEDLISTGATTAETVEQLALEVETLKGLETMALGVLRSGVDTKWSQLNRILDDDLMVDAAGNRRKLIIFTEPKDTLHYLLDKVRARLGNPEAVEVIHGGVSREERRKVVERFMQDKDMLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFGRIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGGRVYDVLGELFDGVALKDLLFEAIQYGEKEEVKARLFQQVDGAVDQANLLELLRRRALTNDTMPEAKVEELRLEMERAEALRLQPHHIQSFFVEAFQHLGGRIKRREEGRWEVTHVPVRIRERDRQIGTGAPLQTQYERICFEKDKINQQPVAAFVCPGHPLLEAVISLIREQYEQIMRQGAILVDDTDAGDALSAIFLLEHTVQDGRVTSAGKPHVISQRLQFAAIDKAGNIVNAGIAPHLNLRPAKPEEVASVRDLLDESWLTTDLEKAAIRFATVELAQGHVAEVKARRLPEIEKVEQEVRARLKKEINYWDSRAFELKEEERAGKKTRVNWQNAQRRAEDLADRQKRRMDQLERERFISSQPPRARGGMVVIPRGLLEARQVPDTAAGVPSHFSEDPEARRRIELAAMEAVMAAERALGNEPADVSAQKIGYDIASHDPKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFILAIVSVTGGRAHTPRYVRGPLVEREPSFLETAIQFDLKRLLERTSEPG*