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SCNpilot_expt_1000_bf_scaffold_748_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(30241..31797)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I7D9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 519.0
  • Bit_score: 837
  • Evalue 9.10e-240
Putative TRAP transporter large permease protein HI0050 {ECO:0000313|EMBL:CDM59263.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 520.0
  • Bit_score: 839
  • Evalue 2.60e-240
TRAP family transmembrane transporter protein similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 508.0
  • Bit_score: 828
  • Evalue 1.00e-237

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
TTGTTCAGTTACGGTATCATGCCGCCGCTGATGTTCCTGGGGCTGATCGTTTTCATGCTCTATGGATTTCCGGTGGCCTTTTCGCTGGCCTCGGTCGGCCTGTTCTTCGGCATCGTCGGAATTGTCACCGGGCACTTCGACCCGGTCTTCCTGCTGGCGCTGCCGCATCGCTTCTTCGGCATCGTCTCCAACGACCTCTTGCTCGCCATTCCCTTCTTCACTTTCATGGGCGCCATCCTGGAGCGCTGCGGGCTGGCGGAGGATCTGCTGGAAGGCACGGGCAAGCTGTTCGGAGCGATCCCCGGCGGCCTCGCTTACGCCGTCATCGTCGTCGGCGCCATCCTCGGGGCGATCACCGGCACGGTCGCCGCCTCGGTGATCACCATGGGCGTCATCTCGCTGCCGATCATGCTGCGCTATGGCTACAACAAACGGCTGGCGACCGGCGTGATCGCCGCATCCGGCACGATCACCCAGCTCATCCCGCCCTCGCTGGTGCTGGTGGTGCTGGCCGACCAGCTCGGCCGCTCGGTCGGCGACATGTATCTCGGCGCCATCGGCCCGTCGATCCTGCAGGTGGCGATCTTCATCCTGTTCATCATGGTGCTGTCGGTGGTGCGCCCCAACGACATGCCGCCGCTGCCGCTGGAGGTGCGCGGCAAGCTGGATGGCAAGCTGCTGTTCAAGGTGCTGGCCGGCATGGTCCCTTCGATCGTGCTGATCTTCCTCGTGCTCGGCACCATCTTCATGGGGCTGGCGACGCCGACGGAAGCCGGCGCGCTCGGCGTCGTCGGCGCGATAGTGCTCGCCGCCCTGCATCGCCGTCTCACCTGGCCGCTCATCCGCCAGGGCATGAGCTCGACCATGCACATCACGTCGATGGTGGTGTTCATCCTCATCGGCTCCACCTGCTTCTCGCTGGTCTTCCAGGGCATGGACGGCTCGCGCTGGATCGAGCACCTGCTGACGGGGCTGCCGGGCGGACCGGTCGGTTTCCTGATCTTCGTCAACATCTTCATTTTCGTGCTCGCCTTCTTCCTCGATTTCTTCGAGATCGCCTTCATCGTTATCCCGATGCTGGCGCCGGTGGCGCAATCGCTGGGCATCGACCTCATCTGGTTCGGCGTGCTGATCTGCATCAACATGCAGACCAGTTTCATGCATCCGCCCTTCGGCTTCGCGCTGTTCTACCTGCGCTCCATCGCTCCGCGCGAGGTCAAGACCACCGACATCTATATGGGCGCCTTGCCCTGGCTCGCCATGCAGCTCATCCTCGTGGCGGTGGTGATCTTCTGGCCGGAATCAGTAACGCATTGGCTCGACAATGGTCCGAAGGTCGATCCGAGCACCATCAACATCGTCGTGCCCGGCTTCGGTGAGAACGGCGGCGGCGCGCAGATGCCGAATTTCGGCCTGCCGCCGCTCGGCGGCGACGGCAAGGGCGGCTTGCCGGGCCTCGGGAGCCGGCCTGCCGAAGGCGTGCCCGGCCAGCAGCCGGCCACGGCGCAACCGGCCAAGCCGGCTGTCGACCTCAGCCAGCCACCGGTCATCCAATGA
PROTEIN sequence
Length: 519
LFSYGIMPPLMFLGLIVFMLYGFPVAFSLASVGLFFGIVGIVTGHFDPVFLLALPHRFFGIVSNDLLLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIVVGAILGAITGTVAASVITMGVISLPIMLRYGYNKRLATGVIAASGTITQLIPPSLVLVVLADQLGRSVGDMYLGAIGPSILQVAIFILFIMVLSVVRPNDMPPLPLEVRGKLDGKLLFKVLAGMVPSIVLIFLVLGTIFMGLATPTEAGALGVVGAIVLAALHRRLTWPLIRQGMSSTMHITSMVVFILIGSTCFSLVFQGMDGSRWIEHLLTGLPGGPVGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVAQSLGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPREVKTTDIYMGALPWLAMQLILVAVVIFWPESVTHWLDNGPKVDPSTINIVVPGFGENGGGAQMPNFGLPPLGGDGKGGLPGLGSRPAEGVPGQQPATAQPAKPAVDLSQPPVIQ*