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SCNpilot_expt_1000_bf_scaffold_1068_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 16126..17478

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VLR9_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 450.0
  • Bit_score: 529
  • Evalue 2.70e-147
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJC73763.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 450.0
  • Bit_score: 529
  • Evalue 3.80e-147
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 447.0
  • Bit_score: 522
  • Evalue 1.40e-145

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1353
ATGGCGACCCATATCGCCGGCATCGCCATCGAGCGCCAGCATGCCGAGGATCGGATGCATTTCATGGCGCATCACGATCCGCTGACGGGCCTGCCGAATCGCTCCTTCTTCAAGGAAAAGCTCAGCCAGACGCTGCATCAGGCGAGGATGAACCGCCAGCATGTCGTTCTCGCCTATGTCGACCTCGACAATTTCAAGCGCATCAATGACAGCCTCGGCCATGGCGCCGGCGACGAGCTTCTGCGCCAGATCGCCGGCCGGATGCTGGAATTCACCCGCGCTTCCGATCTGGTGGTGCGCCTCGGCGGCGACGAATTCGTGCTGGTCTTCGCCAACCAGTCGCGTGGCGAGGGCGATATCCTGCCGCGCTTGCACCAGTTGCGCGCCAGCCTGTCGAAGCCGATGACCATTGCCGGAATGACGGTCTCGGCGACCTGCAGCATGGGCATCGCCACCTTCCCGGAGGACGGCGAGACCATCGATGCGCTGCTCGCCAATGCCGATGCCGCCATGTACCGGGCCAAACAGCTCGGCCGTGACGGGCTGCAGGTGTTCAACGGCAAGGAAACGCCGGCCGCCATCGCCGCCGGCGACCGGCTGGAGGAACTGCGCAGCGCAATCGCCGGCGACCAGCTCTATCTCGACTACCAGCCGCAGATCGATGCCGGCACCGGCCGCATCCTCGGCGTCGAGGCGCTGGTGCGCTGGAACCATCCCGAACTCGGCGTGCAGCCGCCCGGCCATTTCATTCCGTTGGCGGAGGCCACCGGCCTCATCCTGCCGCTCGGCCTCTGGGTGCTGAAGACCGCGTGCCGGCAGAACAAGGCCTGGCAGGTGCTCGGCCTGCCGCCCGTGATCATCGCCGTGAACGTGTCGCCCAGGCAGTTCTGCGATCCGGCGCTGGTCGGGCAGGTCCGGCAGGCGTTGAGCGAGACCGGGCTCGACCCGCGCTATCTCGAGCTGGAGCTGACTGAAAACGCCGTGATGCAGGACACCGACAGCGCGCTCGCCACCATGCGCGCGCTGGAGGAACTCGGCGTGCGCCTGTCGATCGACGATTTCGGCACCGGCTATTGCAATCTCGCGGCGCTGAAGACGCTGCCGGTCAATCGCCTGAAGATGGACCGTTCCTTCATCGAGGCCCTGCCGCACGACGCCACCACCTCGGCGATCGCCTCCGCCGTGATTGCGCTGGCGCAAAAGCTGAAGCTCGGCATCATCGCCGAGGGGGTGGAGACTGCAGAGCAACTGCAATACCTGCGCAACAGCGGCTGCGACGAGGTGCAGGGCTTTCATTTCTCCGCTCCGGTCGATGCCGGCGGCATCGAGGCTCTGTTGCGCCGGGCGGGCTGA
PROTEIN sequence
Length: 451
MATHIAGIAIERQHAEDRMHFMAHHDPLTGLPNRSFFKEKLSQTLHQARMNRQHVVLAYVDLDNFKRINDSLGHGAGDELLRQIAGRMLEFTRASDLVVRLGGDEFVLVFANQSRGEGDILPRLHQLRASLSKPMTIAGMTVSATCSMGIATFPEDGETIDALLANADAAMYRAKQLGRDGLQVFNGKETPAAIAAGDRLEELRSAIAGDQLYLDYQPQIDAGTGRILGVEALVRWNHPELGVQPPGHFIPLAEATGLILPLGLWVLKTACRQNKAWQVLGLPPVIIAVNVSPRQFCDPALVGQVRQALSETGLDPRYLELELTENAVMQDTDSALATMRALEELGVRLSIDDFGTGYCNLAALKTLPVNRLKMDRSFIEALPHDATTSAIASAVIALAQKLKLGIIAEGVETAEQLQYLRNSGCDEVQGFHFSAPVDAGGIEALLRRAG*