ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2071_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 9177..10256

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9L1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 357.0
  • Bit_score: 554
  • Evalue 8.20e-155
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EDT07197.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 357.0
  • Bit_score: 554
  • Evalue 1.20e-154
rbsB; ribose ABC transporter periplasmic protein; K10543 D-xylose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 342.0
  • Bit_score: 213
  • Evalue 8.30e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGGGTGACTTGTTCTCGCTGGCTAAGATGCTAGCCGCTGGGCGCATCTCGCGTCGCAGTTTTATGAAAACGGCGGCAGCTTACGGCGCTGCCTCTGCAACCTTGGGTTCGGCTGCTTTCTCCGCAAAAGCCGAAACGGGCCCTTTGGTCGGCTTCAGTTTCCCGAGCTTCGACGCGTTTCGTTGGCCGCACGACCGCCATTATTTCGAAATGCGGGCAAACGAACTCGGTCTGCGTTATATCATCCAGGGCGCAAACGAAGATGTGTCCACACAGGATTCGCAGATCGATGCGATGCTCTCGCAGGGTATCCAAGCGCTCATCATCATCCCCGTAAATGTCGAGTCCGGCGCGAAGATTGTCGAGCGCGTCAAGGCTGACTCTCCAAACATTCCAATCATTTCCTATAATTATGTAATTCCGTCCGCGGGCATCGATTACTGGGCAGGGCGCGATAATTACCTGGTTGGCGAGCTTCAAGCGAAGCAAGCGCTCAAGGAGGCGAAAAAGGGGAACTGGGCTATCGTCAGCGGCCCTGAGGGGATCGACGTTGCGCGTCAGAAGACCGAAGGAGCGCTGCGGGTTTTGCAGCCGTTTATCGACTCCGGTGAGATCAAGATCGTATCGCACCAATGGCACGATAATTGGCGGCCTGAATCTGCGTTGAAGCAGATGGAGGATGCGCTCACTAAGAACAGCAACGATATCCAAGCCGTGGTTGCAAACGAAGAGGGACTGGCTCTCGGCGCACTCAAGGCTCTGACGGAAGAAGGCCTTAACGGCAAAGTCTGGATCTGCGGCGAAGACGTGTGGCCGGAAGGTGCTCGCGCAATCGTCAAGGGGGATATGGCCATGAGCGCTTGGACCGACCTTATCCAGATGGGGCGGGTCGCAGCCGATGCAGCTCACGCTCTCATCAAAGGCGAGACGCCAGAGAGCAATGACAGCATTGAGGTTGGCGGCAGGAAAATACCTGGCATGCGAATTCAGTCGCGCGTCGTGAATAAGGAGACGCTGCCCGAATTCCTCAAGTTGACCGACTGGTTGAAGCCCGACGATATCGGCCTCAAGGTCCAGTAG
PROTEIN sequence
Length: 360
MGDLFSLAKMLAAGRISRRSFMKTAAAYGAASATLGSAAFSAKAETGPLVGFSFPSFDAFRWPHDRHYFEMRANELGLRYIIQGANEDVSTQDSQIDAMLSQGIQALIIIPVNVESGAKIVERVKADSPNIPIISYNYVIPSAGIDYWAGRDNYLVGELQAKQALKEAKKGNWAIVSGPEGIDVARQKTEGALRVLQPFIDSGEIKIVSHQWHDNWRPESALKQMEDALTKNSNDIQAVVANEEGLALGALKALTEEGLNGKVWICGEDVWPEGARAIVKGDMAMSAWTDLIQMGRVAADAAHALIKGETPESNDSIEVGGRKIPGMRIQSRVVNKETLPEFLKLTDWLKPDDIGLKVQ*