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SCNpilot_expt_1000_bf_scaffold_1143_curated_34

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(33078..33887)

Top 3 Functional Annotations

Value Algorithm Source
Amino acid ABC transporter substrate binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETA4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 269.0
  • Bit_score: 498
  • Evalue 4.00e-138
Amino acid ABC transporter substrate binding protein {ECO:0000313|EMBL:EYR80309.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 269.0
  • Bit_score: 498
  • Evalue 5.60e-138
Periplasmic component of amino acid ABC-type transporter/signal transduction system similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 269.0
  • Bit_score: 487
  • Evalue 2.90e-135

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGACGAAATCTGCAGTCTTCGCCCTCGGCCTCGCCGCCGCGACCGCCCTCACCACCCCGGCCTTCGCCGACAAGCTCGACGACGTGATCGCTTCCGGCACGCTGCGTTGCGCGGTCGTGCTCGACTTCCCGCCGATGGGCTCGCGCGACGAGAACAACAACCCGATCGGCTTCGACGTCGACTACTGCAACGACCTGGCCAAGGCGCTGGGCGTTACCGCGGAAATCGTCGAAACGCCGTTCCCGGAACGCATCCCGGCCCTGATGTCCGGCCGCGTCGACGTCGGCGTCGCCTCGACCTCGGATACGCTGGAACGCGCCAAGACCGTCGGGATGACCATTCCCTACTTCGCCTTCGAAATGGCCGTCACCGCCAATGACAAGTCGGGCATCAAGTCCTTCGAAGACATGAAGGGCAAGACCGTCGGCGCCACCGCCGGCACCTTCGAGGCCATCGCGCTCGAAAAGTCGGTCAAGGAATGGGGCACCGGCGAGTTCCGTCCCTACCAGACGCAGGCGGACGTCTTCCTGGCGCTGAGCCAGGGCCAGATCGACGCCACCGTCTCGACCTCGACGGTTGCCCAGTCGAACGTCAAGAGCGGCAAGTTCGCCGGCATCTCGGTCGTCGGCAAGGCGCCCTACGACATCGACTACGTCGCCCTCTTCACCAACCGCGAAGAGTACGGCTTCATCAACTACCTGAATCTGTTCGTAAACCAGCAGGTTCGCACCGGTCGTTACAAGGAACTCTACGAAAAGTGGGTTGGCGGCCCGGCCCCCGACCTCTCGGTCCCCGGCGTCTATCGCTGA
PROTEIN sequence
Length: 270
MTKSAVFALGLAAATALTTPAFADKLDDVIASGTLRCAVVLDFPPMGSRDENNNPIGFDVDYCNDLAKALGVTAEIVETPFPERIPALMSGRVDVGVASTSDTLERAKTVGMTIPYFAFEMAVTANDKSGIKSFEDMKGKTVGATAGTFEAIALEKSVKEWGTGEFRPYQTQADVFLALSQGQIDATVSTSTVAQSNVKSGKFAGISVVGKAPYDIDYVALFTNREEYGFINYLNLFVNQQVRTGRYKELYEKWVGGPAPDLSVPGVYR*