ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2412_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(16575..17324)

Top 3 Functional Annotations

Value Algorithm Source
Rcorf65 n=1 Tax=Agrobacterium rhizogenes RepID=A8W066_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 246.0
  • Bit_score: 322
  • Evalue 4.80e-85
Rcorf65 {ECO:0000313|EMBL:ABW33622.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 246.0
  • Bit_score: 322
  • Evalue 6.70e-85
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 246.0
  • Bit_score: 321
  • Evalue 2.60e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGCACGACCCATGTTCCCGAAGACACACGCTCAGCCCCTGAAATCTTAGGGGTGGAGTTCGGACGGACGAGCGATGGTTTTCCAGTTGCCCGTCTCGGCGATCTCCTGCTCGCCATGCTGCCGCGCGGCAGCGGTCGCTGGTATCTCGCAAGCGCCTGGCGTCTCGTGCGGCCATTTTCAGAGCTGAAGCGCGAAGAGTTCTACGGGCACGACGGCGACCTTGCCGATGAAGCGGCGTTCCAGGCGCGTGTTCTGGAGACGGCCGAGCATCGCCGGGAGCTTGCTGCCCTGCGGCGCCTCCAGACCCGCATGGTCTGCAGCACGCCATGGGGCGCGTCGCACCTCGCCTCGATCTATGCCGAGGGCATCGTCTCGCACATGACCGCCGGCCATGGCGGTTTCCGGCTCTCGGCCGAGCGAAACGCCAGGGTCATGCCGGCCTTGCGGATCGACTCTGGATGGTACGAGGAGGACGACGCCTGGGCGATCGTCGCCCTCACATTCCCCGATCTCTTCACGAGCTACGAGCGGAGGCTCGCGGACCGGACCATGCGGGACAAATGGCCCGACGAATGGGAGGCGATCCACGGGCGGACCCTTGAACCGGGCGAGTCGACGGGTAAGGATCGCCGCGACTTCGAGCGCCGGCACGCCGACGACTGGATCGTCGTGTCGGCGATTTCCTCCAGCCATCATGCGGGGATGGTCGAGGTGGTGGCCGTTCTTNNNNNNCGCCCATGCCATTGA
PROTEIN sequence
Length: 250
MSTTHVPEDTRSAPEILGVEFGRTSDGFPVARLGDLLLAMLPRGSGRWYLASAWRLVRPFSELKREEFYGHDGDLADEAAFQARVLETAEHRRELAALRRLQTRMVCSTPWGASHLASIYAEGIVSHMTAGHGGFRLSAERNARVMPALRIDSGWYEEDDAWAIVALTFPDLFTSYERRLADRTMRDKWPDEWEAIHGRTLEPGESTGKDRRDFERRHADDWIVVSAISSSHHAGMVEVVAVLXXRPCH*