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SCNpilot_expt_1000_bf_scaffold_3250_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2..682)

Top 3 Functional Annotations

Value Algorithm Source
ribose/galactose/methyl galactoside import ATP-binding protein 2; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 225.0
  • Bit_score: 384
  • Evalue 2.20e-104
ABC-type sugar transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2WYU8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 227.0
  • Bit_score: 387
  • Evalue 1.10e-104
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EJK88298.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 227.0
  • Bit_score: 387
  • Evalue 1.50e-104

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGTCGGAATTGCTGCTGGATGTGGACGGGCTGCAGAAGTCGTTCAACGGCGTCGCGGCATTGCGCAACGGCCGCCTGCAATTGCAGGCCGGCTCCGTGCATGCGCTGTGCGGCGGCAACGGCGCCGGAAAGTCCACCTTCCTGAAGATCCTCATGGGCATCCACAATCGCGACGGCGGCACGATCCGCCGGCGCGGCACCGACGTCGTCTATTCGACACCGGCCGCGGCGCTGGCCGCCGGCATCGCCATCATCGAGCAGGAACTGAGCCCGGTTCCGCACATGACGGTGGCGGAAAACATCTATCTCGGCCGCGAGCCTTCCGCCCGCTTCGGCGGAATCGACTTCAAGACGATGAACCGCAATGCGCAAGGCCTGCTCGACCGCCTCGAATTCGACATCCGCGCCAACCAGTTCATGATGAACCTGTCGGTGGCGCAGGTACAGCTCGTCGAAATCGCCAAGGCGCTGAGCCACGATGCCGAAGTCATCTTCATGGACGAGCCGACCTCGGCCATCGGCGAAAAGGAGGCGCAGCAGCTTTTCGCCGCCATCGGGCGCCTGAAGGCCGAAGGCAAGGGCATCGTCTATGTTTCGCACCGCCTGTCGGAAATTTTCCAGATCGCCGATTCCTACACCGTCTTCCGCGATGGCGCCTATGTCGACAGCGGCAGGCTGGCG
PROTEIN sequence
Length: 227
MSELLLDVDGLQKSFNGVAALRNGRLQLQAGSVHALCGGNGAGKSTFLKILMGIHNRDGGTIRRRGTDVVYSTPAAALAAGIAIIEQELSPVPHMTVAENIYLGREPSARFGGIDFKTMNRNAQGLLDRLEFDIRANQFMMNLSVAQVQLVEIAKALSHDAEVIFMDEPTSAIGEKEAQQLFAAIGRLKAEGKGIVYVSHRLSEIFQIADSYTVFRDGAYVDSGRLA