ggKbase home page

SCNpilot_expt_1000_bf_scaffold_560_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(25797..27950)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide synthesis/transport transmembrane protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD09_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 713.0
  • Bit_score: 787
  • Evalue 8.80e-225
Succinoglycan biosynthesis transport protein ExoP {ECO:0000313|EMBL:EYR81347.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 759.0
  • Bit_score: 792
  • Evalue 3.80e-226
polysaccharide synthesis/transport transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 713.0
  • Bit_score: 787
  • Evalue 2.80e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2154
ATGTCGGGCGCAAATCATCAGCAGGATGTCGATATCGATCTCGGCCAGCTTTTCCGGGCGATCTGGAAAAGGAAGGGCGGGGTTCTCGCCATCACCGTCGCCGCCGCAATCCTGGCCTATGGCGGCGCGCGGCTGATTTCGCCGACCTATCGCAGCGAAAGCCGCATCCTCATCGAACAGCGCACGCCGACCTATAACAGCGGCAAGGGCGACCAGGGCGCGCCCGGCGAAAGCCAGCCGCTGCTCGACGACCTCAACATCGCCAGCCAGGTGCAGGTGCTGCAATCCGTCGACCTGATCAAGCAGGTGGCCCGCGACCTGAAGCTCTACGAGCGCGAGGAATTCGACCCGACCGTCAAGCCGTCGGCCATCTCCGACGTCATGGTGCTGCTCGGCCTCAAGAGCAATCCGCTGGATCTCGCTCCCGAGGAGCGGGTCATCAAGGAATTCACCGACCGGCTGACCGTCTACCAGGCGGAGAAGTCGCGCGTCATCGGCATACAGTTCTCGTCGAAGGATCCGAAGCTCGCCGCCGCCGTGCCGAACGAGATGGTGCGCGTTTATCTATCGTTGCAAAGCGGCGCCAAGCTCGACACCAATTCCGAGGCCGCCCGCTGGCTGGAGCCGGAAATCGCCAACCTGCGCGAAAAGGTGCGCGAGGCGGAAAAGAAGGTTGCCGATTACCGCGCCTCGGCCGATCTGCTTCAGACCGGCGATGCGACCACCGGCGGCACCTTCGTCAGCCGCCAGCTCGCCGATATCTCCACCGAGCTGACCCGCGTACGCGGCGAGAAGGCGACGGCGGAGGCACGCGCTGAAAACGTTCGCGCCGCCTTGCAGGACGGCCGTTCGCTCGACACGCTGACCGATGTCGCCGGCGCGCAAATCATCCAGCGCCTCAAGGAAACGCAGTCGCAGCTTCAGGCGCAGATTTCCGATCTCTCGACTTCGCTGCTCGACGGCCATCCGCGCATCAAGGGCCTGCGCGCACAGCTGGCGGATGTGCGCGCCCAGATCGAGCGCGAGGGCCAGAAGGTCATTTCCGGCTTCACCAACGATGCCAAGGTCGCGCAGATGCGTGAGCGCCAGCTTCTCGGCCAGCTCAATGCCCTGAAGGCCGATTCGGCCCGTGCCGGCAACGATACGGTGGAGCTGAATGCCTTGGAGCGCGAAGCGGCCGCCCAGCGGCAATTGCTCGAAACCTATCTCGCCCGCTACCGCGAGGCCTCCTCGCGCATCGACAAGAATGCGACGCCGGCCGATGCCCGCATCATCTCTCGCGCCGTCGATCCGCAGGAGCCCTATTTCCCGAAGGTGCTGCCGATCGTCATCGTCGCAGCGCTCGCTGGTTTCGTGCTCTCCTCCGTTGTCATCATGCTGATGGAACTGTTCAGCGGTCGCGCCCTGAAGCCGGTCGGCCCGGCTGTGCCGGCGGTTGTCGCAGCACCCATCGTCGCGAAGCGCCCTGACGAGGAGGTGAAGGATGCGCCCGTCAGCCTTCTTGCCGACCAGCCGGAGGAACTCCCGGCGGCTGTCGCCCAACCGGTGGATGCGCAGCCGGAAGAGGACGAGTTTTCCGTCGCCTCGGTCGCCGCCCTCTTGGCGGCGCGCCCAGGCAAGATCGTCATCAGCCTGTCGCCGGATGGCGACGCCGGCTCGGCGATGACGGTGGCGCTCGCCCGGCAGCTCGGTGAAAACGGCCTGCACACCGTGCTGCTCGATCTCACCGGCTCCGGTTGCCCGAGCCGCCTGATGGCATCAGTCCCGAAACTGCCGGGCATCACCGACCTGCTGCAAGGCAAGGCCGCTTTCGCCCAGACCATCCATTCCGACCGGGATTCGACGGCGCATGTCATCCCGCAGGGCAATGCCGATTTCATCGGCGCCATGCGCGCTTCAGAACGCCTTTCGATGATCGTCGATGCCCTGGCCGAGGTTTACGATCGTGTCGTCGTCGAATGCGGACCGGCGCCCGCCCATGCCATCGAGCGGGTATCGCGCAATCGCGAGGCGCATATCGTCCTGTCGATGCCGAAGCCGGAGGAGCGCAAGCTGGCCAAGGCGCTTGGCGAACTCTCCAAGGCCGGTTACGCGAATCCGATCCTGCTCTCGGACCCCGATCATCCTTCGCTCGCGGCGTCGCGCGCCGCCTGA
PROTEIN sequence
Length: 718
MSGANHQQDVDIDLGQLFRAIWKRKGGVLAITVAAAILAYGGARLISPTYRSESRILIEQRTPTYNSGKGDQGAPGESQPLLDDLNIASQVQVLQSVDLIKQVARDLKLYEREEFDPTVKPSAISDVMVLLGLKSNPLDLAPEERVIKEFTDRLTVYQAEKSRVIGIQFSSKDPKLAAAVPNEMVRVYLSLQSGAKLDTNSEAARWLEPEIANLREKVREAEKKVADYRASADLLQTGDATTGGTFVSRQLADISTELTRVRGEKATAEARAENVRAALQDGRSLDTLTDVAGAQIIQRLKETQSQLQAQISDLSTSLLDGHPRIKGLRAQLADVRAQIEREGQKVISGFTNDAKVAQMRERQLLGQLNALKADSARAGNDTVELNALEREAAAQRQLLETYLARYREASSRIDKNATPADARIISRAVDPQEPYFPKVLPIVIVAALAGFVLSSVVIMLMELFSGRALKPVGPAVPAVVAAPIVAKRPDEEVKDAPVSLLADQPEELPAAVAQPVDAQPEEDEFSVASVAALLAARPGKIVISLSPDGDAGSAMTVALARQLGENGLHTVLLDLTGSGCPSRLMASVPKLPGITDLLQGKAAFAQTIHSDRDSTAHVIPQGNADFIGAMRASERLSMIVDALAEVYDRVVVECGPAPAHAIERVSRNREAHIVLSMPKPEERKLAKALGELSKAGYANPILLSDPDHPSLAASRAA*