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SCNpilot_expt_1000_bf_scaffold_1159_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15953..17470)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXP5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 503.0
  • Bit_score: 425
  • Evalue 1.10e-115
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EYR80079.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 503.0
  • Bit_score: 425
  • Evalue 1.50e-115
Cyclic diguanylate phosphodiesterase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 479.0
  • Bit_score: 223
  • Evalue 1.90e-55

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGACGGCGATGACGGCGCGACTCTTTGCAAAAACCTCCAACTGGATGGTGCATGGCATACATACAGCCTGCGCGCTGCTGGTCGTCGTCTTCGCGGCCAGCGTTTTCCTTGTGCTCGATGCCTCGGTGGAGCAGGCCAACAAGTTCGGCCAGGCGACGGAGCGCAAGCTCGTGCAGCAGGAGTTCCAGCACCTGATCGACGAGATCGTCAAATATCAGGCGGCGGTCTCGATCTGGGATGCGACGGTCGCGCAAATCCGTTCGTCCGAGTTCAGCCATTATTTCGTCGAGCGCCAGCTTCGCACTCGCCTGTGGTCGGAATTCGGCTTTTCGTGGACGGTTTTCGCGCCGTCGGGCAAGCAAGCGGTCGTTGCCGTCAATCGCGGCGAGGAGGTCTCTCCCGACAAAGCCGACGCGCTGCTTTTCTGGATCGACGACCTCGTTTACGAGGCGACGCAGAAATACTGGGCGGCGCTGAAGAAAAGCGATGGCGGTTTCGTCGTCCGCAGGCCGGCGCCCGATCCCGACAAGCTGTCACCGGAGTTGCCCTTCATCCATGCCGCCGACATGCGCATGGTCGATGGCCGTCTCAGCATCGTCGTCGTCCAGGCGGTGCTGCCGCGCTCGCTGTTTATCCCCGCCGGCTTCGAGCAGCCGACGCTCATGGTCAGCGTCAAGCCGATCTCGGACAAGATGCTGGCGACGATGAGCGAACGGCTCGGCATCGGCGGCCTGCATGTGGTCAAGGAAGATGAGCTCAAGGAGCGCCCGACGGCCTACACGCCGGTCGGCAAGGGTTTTACCGATGGCCCGTTCCTCGTCGCCTGGCAGCCGAACGCGCCCGGCCCGACCATCTGGAAGGCGGTCATGCCCAAGGTGGCGTTGCTTTCGGCACTCGCGGCGATTGCCATGGGCTTCATCGCCTGGCGTTTCGGGATGCTGGTGCGGGCCCTGCAGCGCAGCGAGGCGAGCAACCGCTTCCTTGCCAAGCATGACGGCCTTACCGGCCTTGCCAACCGCATCGGTTTTCAGGAAGCGCTCGAAGCTTTCACCGGCACCGTCCGCGACGGCCAGCTTGCGATCATCGCCGCCGACCTCGACAAGTTCAAGATGGTCAACGACCGCTTCGGCCATGCCGCCGGCGATGCCGTGCTGCGTACCATCGCCCAGCGTTTTCGCGATCGAGTGGGCGATCGCGGCATCGTCGCCCGCCTCGGTGGCGATGAATTCATGGTGATCCTGCGCGATGTCGCCGATCACGACGAGGTGCTCGCCGTCGCCAACGGCATGGTCATCGATGCGCAGATTCCCATCCCCTACAACAATCTGCCGCTCCAGGTCGGCAGCAGCGCCGGCATCGCCTTCTATCCCCAGCATGGCCGCAACCTGCGCAACCTCGTGCATTCCGCCGATATGGCGCTGTACCAAGCCAAGAATTGCGGCCGCGGCCGATCGGTGATCTTCGAAAACGACCAGCCGGAATCAGTTCCGGAAGAAACGCAGATTGCCGCAGCCTGA
PROTEIN sequence
Length: 506
MTAMTARLFAKTSNWMVHGIHTACALLVVVFAASVFLVLDASVEQANKFGQATERKLVQQEFQHLIDEIVKYQAAVSIWDATVAQIRSSEFSHYFVERQLRTRLWSEFGFSWTVFAPSGKQAVVAVNRGEEVSPDKADALLFWIDDLVYEATQKYWAALKKSDGGFVVRRPAPDPDKLSPELPFIHAADMRMVDGRLSIVVVQAVLPRSLFIPAGFEQPTLMVSVKPISDKMLATMSERLGIGGLHVVKEDELKERPTAYTPVGKGFTDGPFLVAWQPNAPGPTIWKAVMPKVALLSALAAIAMGFIAWRFGMLVRALQRSEASNRFLAKHDGLTGLANRIGFQEALEAFTGTVRDGQLAIIAADLDKFKMVNDRFGHAAGDAVLRTIAQRFRDRVGDRGIVARLGGDEFMVILRDVADHDEVLAVANGMVIDAQIPIPYNNLPLQVGSSAGIAFYPQHGRNLRNLVHSADMALYQAKNCGRGRSVIFENDQPESVPEETQIAAA*