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SCNpilot_expt_1000_bf_scaffold_1159_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(25872..26570)

Top 3 Functional Annotations

Value Algorithm Source
rpiA; ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) (EC:5.3.1.6) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 230.0
  • Bit_score: 393
  • Evalue 4.90e-107
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 230.0
  • Bit_score: 393
  • Evalue 2.20e-106
Ribose-5-phosphate isomerase A n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JHH0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 230.0
  • Bit_score: 393
  • Evalue 1.60e-106

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGACGCCCGCGAAATGAAGATCAAGGCCGCAGAAGCGGCGCTTCAGCATGTCGAAAACGGCATGCGGCTGGGGATCGGAACCGGGTCGACCGCTGAGGAATTCGTAAGGCTGCTGGCCGAAAAGGTCGCAGGCGGCCTGAAGGTCGAGGGCGTGCCCACCTCCGAGCGCACCGCGCGTCTCTGCGTCGAACTCGGCGTGCCGCTGAAATCCCTGGACGAACTTCCGGAACTCGATCTCACCATCGACGGCGCCGACGAGGTCGATGCCTCGCTGCGCCTCATCAAGGGCGGCGGCGGCGCGCTGCTGCGCGAAAAGATCGTCGCCTGTGCCTCGCAGCGCATGATCGTCATCGCCGACGAGACCAAGGTCGTCGAGACGCTCGGCGCCTTTCCGCTGCCGATCGAGATCAACGCCTTCGGCCAGATCGCCACCCGCATCGCGGTGGAAAAGGTGGCCGCGCGCCTCGGTCTTTCCGGCGAATTGGAGCTGCGTTCCTCCGGCGACGGGCTTTTCATGACCGACGGCGGACATCTCATTCTCGATGCATCATTTGGCCGTATTCCTGATGCAGAGGCGCTTTCGAGCCAGCTGAATTCGATCCCCGGTGTGGTGGAGCACGGGCTGTTCATAAACATAGCATCGCTTGCCGTGATCGCAGGCCCTTCGGGCGCGAGGACACTGGAAGCGAAACAGTGA
PROTEIN sequence
Length: 233
MDAREMKIKAAEAALQHVENGMRLGIGTGSTAEEFVRLLAEKVAGGLKVEGVPTSERTARLCVELGVPLKSLDELPELDLTIDGADEVDASLRLIKGGGGALLREKIVACASQRMIVIADETKVVETLGAFPLPIEINAFGQIATRIAVEKVAARLGLSGELELRSSGDGLFMTDGGHLILDASFGRIPDAEALSSQLNSIPGVVEHGLFINIASLAVIAGPSGARTLEAKQ*