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SCNpilot_expt_1000_bf_scaffold_6032_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 2896..3927

Top 3 Functional Annotations

Value Algorithm Source
heme lyase subunit CcmF n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00037E4E1E similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 347.0
  • Bit_score: 538
  • Evalue 5.80e-150
C-type cytochrome biogenesis protein CcmF {ECO:0000313|EMBL:EJJ28627.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 346.0
  • Bit_score: 537
  • Evalue 1.10e-149
cytochrome C biogenesis protein CcmF; K02198 cytochrome c-type biogenesis protein CcmF similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 344.0
  • Bit_score: 535
  • Evalue 9.10e-150

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
GTGATCTTCATCGGCGGGGCGCTGTCGCTGTTTGCCTTCCGCGCGCCGATGCTGAATGCCGGCGGGCTGTTTGCGCCGATTTCGCGCGAGGGCGCGTTGGTGCTCAACAATCTCATCCTGACCGTCTCGACCGCGACGGTGCTGATCGGCACGCTCTATCCGCTGCTTCTGGAGGCGCTGACCGGCGAGAAGATCTCCGTCGGCCCGCCATTCTTCAACCTGACCTTCGGGCTGCTGATGGTGCCGCTGCTGCTCGCCGTCCCCTTCGGGCCGCTGCTGGCGTGGAAGCGCGCCGACCTGCTCGGCGCGCTGCAACGCCTGTTCGTGGCCGCCGGCCTGTCCTTCGCCGTGGCGCTGGTCTTTTATTACGATCAATATGGCGGACCGGTCATGGCCGTCTTCGGACTTGCCGCCGGCCTGTTCCTCGTCTTCGGGGCCTTGACCGATCTGTGGCTGCGTGCCGGCTTCGGCAGGCTGTCGACCTCGATCGGCTTGCGNNNNNNNNNNNNNNNACGTTCGGCCTTCGGCACGGCGCTGGCGCATATGGGCCTCGGCATCACCGTCCTCGGCATCGTCGCCGTCACTGCCTTCGAGACTGAGCATGTGGTGGAGATGAAGCCGGGCATGAGCGTTCCCGCCGGAGGCTATAGCCTCACCTTCGACGGCATGAAATCGGCTGTCGGCCCGAACTACACAGAGGATCGCGGCCATTTCACCATCCGCCGTGGCGGCACGGTCAAGGCCGACGTCTGGTCTTCGAAGCGCCTCTACACGGCGCGCCGCATGCCGACTACGGAAGCCGGCATCGTCACCTTCGGCCTGAGCCAGGTCTATGTGTCGCTCGGCGACTTGATGGCCGATGGCGGTATCGTCGTGCGGATCTGGTGGAAGCCCTACATCCTGTGCATCTGGGGAGGCGCGCTGGTGATGATGCTTGGCGGTTTCGTCTCGCTCAGCGATCGCCGCCTGCGGGTCGGGGCGCCCAGCCGCCGTGCGCGCCCCGCAGGTCCGGCGCTGGAGCCTGCCGAATGA
PROTEIN sequence
Length: 344
VIFIGGALSLFAFRAPMLNAGGLFAPISREGALVLNNLILTVSTATVLIGTLYPLLLEALTGEKISVGPPFFNLTFGLLMVPLLLAVPFGPLLAWKRADLLGALQRLFVAAGLSFAVALVFYYDQYGGPVMAVFGLAAGLFLVFGALTDLWLRAGFGRLSTSIGLXXXXXXRSAFGTALAHMGLGITVLGIVAVTAFETEHVVEMKPGMSVPAGGYSLTFDGMKSAVGPNYTEDRGHFTIRRGGTVKADVWSSKRLYTARRMPTTEAGIVTFGLSQVYVSLGDLMADGGIVVRIWWKPYILCIWGGALVMMLGGFVSLSDRRLRVGAPSRRARPAGPALEPAE*