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SCNpilot_cont_500_bf_scaffold_4_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 28193..29647

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 481.0
  • Bit_score: 644
  • Evalue 8.70e-182
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 483.0
  • Bit_score: 627
  • Evalue 4.20e-177
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Afipia birgiae RepID=UPI00036FAFC7 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 481.0
  • Bit_score: 645
  • Evalue 3.60e-182

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1455
GTGAGACTGCGCGACCTGCTGGCGCGATCCGATCTCGTCGCCGGCGACATCGAGATCACCGGCGTCAGCGCAGACAGCCGCAAGGTCAAGCCGGGCTTTCTGTTCGTCGCGATCCCCGGCACCAAAACCGACGGCGCGCGCTTCATCGAGCAAGCGGTGAAAGCCGGTGCGGTCGCGATCGTCGCCGAAGGCGCTGCGCCATCGGCTCCAGTAGGCGTTGCCTCCGTTTCAACCACGAATGCGCGGCGCGATCTCGCCCTCGCGGCAGCACGGCTCCATGCGCGCCAACCGGCAACCATCGTTGCCGTTACCGGCACCAGCGGCAAGACATCGGTCGCCGCGTTCACGCGGCAGATCTGGGCGGCGCAGGGATATGCTGCCGCCAGCATCGGCACGGTCGGTGTCGTCTCGCCCAAGGGTGAGGTCTACGGTTCGCTGACCACGCCCGATCCGGTCGATCTGCATCGTGCCATCGACACGCTCGCGGGCGAGGGTGTCACGCATCTCGCGCTGGAAGCGTCCTCGCACGGGCTCGACCAGCATCGCCTCGACGGTGTGCGCATCAAGGCCGGCGGCTTCACCAATCTATCGCGCGACCATCTCGATTATCACGCGACACTCGAAGCCTATCTCGCCGCCAAACTGCGGCTGTTCACCGATCTGGTCGCGGCCGATGGTGCGGCGGTAATCGCCGCCGACCACGAGCAATCGGCGGCGGTGGCACAGGCGGCGCGCCAGCGCGGCTTGCGCGTGTTCACGGTCGGCCACGTCGGCGAGGCGATCCGCCTGCGCGATGTGGCGATCGATGGCTTCACCCAGCGCCTGTCGCTCGACGCCGATGGGCGCACGGTCATGGTGAAGTTGCCGCTGGTCGGTGCGTTCCAGATCGAGAATGCGCTGGTGGCGGCCGGGCTCGCCATCGTCACCGGCAGCGATCCCGATCAGGTGTTTGCCGCGCTCAATCATCTCGAAGGCGCGAAAGGGCGGCTCGAGTTCGCCGGCCGCTTCCGCGATGCGCCCGTGTTTATCGATTATGCCCACAAGCCCGATGCGCTCGCCAAGGCGCTCGACGCGCTGCGGCCCTATGCGCGCGGACGGCTCGTGGTGGTGTTCGGCGCCGGCGGCGACCGCGATGCCGGCAAGCGGCCGATCATGGGCGCGATCGCCGCGGAGAAGGCGGACCGTGTCATCGTCACCGACGACAATCCGCGCAGCGAGAACGCCGCCGCGATCCGCGCCGCGATCATGGCGGCCGCGCCGGGGGCGCGCGAGATCGGCGACCGCGGCGAGGCGATCCATCGGACTATCGCCGACCTGCAGGCGGGCGACGTGTTGCTGATCGCCGGCAAAGGTCACGAAACCGGCCAGATCATCGGCGATCGAACTATCCATTTCAGCGATCATGAAGCGGTCGCGGCGGCGCTGGCCGATCTTGGGAGCAAAGATAAAGAATGA
PROTEIN sequence
Length: 485
VRLRDLLARSDLVAGDIEITGVSADSRKVKPGFLFVAIPGTKTDGARFIEQAVKAGAVAIVAEGAAPSAPVGVASVSTTNARRDLALAAARLHARQPATIVAVTGTSGKTSVAAFTRQIWAAQGYAAASIGTVGVVSPKGEVYGSLTTPDPVDLHRAIDTLAGEGVTHLALEASSHGLDQHRLDGVRIKAGGFTNLSRDHLDYHATLEAYLAAKLRLFTDLVAADGAAVIAADHEQSAAVAQAARQRGLRVFTVGHVGEAIRLRDVAIDGFTQRLSLDADGRTVMVKLPLVGAFQIENALVAAGLAIVTGSDPDQVFAALNHLEGAKGRLEFAGRFRDAPVFIDYAHKPDALAKALDALRPYARGRLVVVFGAGGDRDAGKRPIMGAIAAEKADRVIVTDDNPRSENAAAIRAAIMAAAPGAREIGDRGEAIHRTIADLQAGDVLLIAGKGHETGQIIGDRTIHFSDHEAVAAALADLGSKDKE*