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SCNpilot_cont_300_bf_scaffold_282_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 18121..20019

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system Vgr family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIG8_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 632.0
  • Bit_score: 559
  • Evalue 5.90e-156
ImpA family type VI secretion-associated protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 632.0
  • Bit_score: 559
  • Evalue 1.80e-156
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ACK51287.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 632.0
  • Bit_score: 559
  • Evalue 8.20e-156

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1899
ATGAGTTCGAAACCGACCCAGGCGCAGCGCGTTGCCGAGCTTACGACCGCGCTGGGCAAGGACAAGCTGGTCCTGACGCGCCTCGACGTGTCCGAGGGCCTGAGCGAGCTGTTCGAAATCAGGGCCGAATGCCTCAGCGAGGACGAGAACCTCGATCTCGGCTCGATCATCGGCAAGGTCGCGACCGTCCGCTTCACCACCGCCGCCAACAAGAAGCGGTTTTTCTCGGGCGTCGCCGTCGAGGCCTCGTGGAACGGGCGCGAGCAGAACATGTTCGCCTATCGGGTCGTCCTGCGGCCCTGGACCTGGCTGCTGAGCCAGGCGACCGACTCCCGTATTTTCCAGAACCAGAGCGTCGTCGACATCATCAAGGCGGTCTTCGACAAGGCCGGCTTCAGCGGCCAGTACGATGCGAGCCAGCTCGAAAGCTATCCGCCCATCGAGTACTGCGTGCAGTATCGCGAGTCGCATCTCAATTTCGTGCTCCGCCTGATGGAGCAGTTCGGCATTTATTATTTCTTCAGGCACGAGGCCGGCAAGCACACGATGGTGCTGGCGGACTCCACCTCCGCCCACAAGCCGATCCCCGACCTGCCGAAGGTTCGCTTCGCCGAAACCGACCAAAGCGTGCGGGACGACGAGGAGGTGCTGCGAGAATGGGCGTCCGAACGTCGTTTCCGCAGTGGCAAGGTGGTTGTGAAGGCGTTCGATTTCGCCAAGCCGACGGCCGACACCAAGAGCGAGAAGTCGGCCCCCGGCGGCTATGAGAAGGACAGCATGGAGGTCTTTCTCTATCCCCACAAATACAAGAAGGGCGAGGAGGGCGACCTTGGCCAGAAATACGTCAACGCGACGCTGCATTCGCTCCAGTCGCAGGACAAGCGCCGCTATGCGGCCGGCAACGCGCCCAGCATTTTCCCCGGCGGACTGATCACGCCGGAGAAACTGAAGCCGGAGTCCGAGGTTCAGGAATATCTCGTCGTCAGCGCGCAGCACACCTTCGTCACCGAAACCTTCCGGTCCGGCTCGGGCGGCAAGCAGGGCGATCCGTATTATGGACATTACGTCCTGCAGCCGAAGGATCGTCCGTTCCGGGCGCCGATCGTGACGCCGAAGCCCGTGATCTACGGGCCGCAGACCGCCGTCGTCGTCGGTCCCAAGGGCGAGGAAATCCACACCGACAAGTACGGCCGCGTGAAGTTGCAGTTCCATTGGGACCGCGAGGGCAAGAAGGACGAGAAATCCTCCCGCTGGGTGCGCGTGTCGCAGATCTGGTCCGGCAAGCAGTGGGGCGGCTTCTACGTTCCGCGCATCGGCATGGAGGCCGTCGTCGAGTTCATCGAGGGCGATCCGGACCGTCCGCTCGTCGTCGGCACGGTCTACAACGCCGAGAACATGCCGCCGGTGGAGATGCCGGCCAACCAGACGCAGCACGGCATGAAGACCCGTTCGTCCAAGGGCGGCGGCGAGGCCAACTACAACGAGCTCGTCTTCGAGGATAAGAAGGGTTCCGAATTCATCCGCATGCACGCTGAAAAGGTGCTCGATGTGACGGTCGAGGACACCGAGAGCTGGGTCGTCAACGGCAAGAACCGGAAAGGCCCGGGCGACGCGGCCGTCAAGACGAAGATCGAAAAGGGTGACGATGTTTTCGACGTTCTCGACGGCAATCAGAACACCACGATCAGCAACGACTGGACGGTGAATGTCGGCAACGACATCTTTATCGAGGCCGGCAACCAGATTACGCTCAAGGTCGGCATCAGCACGATCGTCATGACCAAGGACGCGATCACCGTGAAATCGGGAACCATCAACACGGATGCGCCGTTCACGAACATCAACGCCACGACCGTCCTTGATCAGAAGGGTGGCGTCATTCAGTTGAATTGCGGTTGA
PROTEIN sequence
Length: 633
MSSKPTQAQRVAELTTALGKDKLVLTRLDVSEGLSELFEIRAECLSEDENLDLGSIIGKVATVRFTTAANKKRFFSGVAVEASWNGREQNMFAYRVVLRPWTWLLSQATDSRIFQNQSVVDIIKAVFDKAGFSGQYDASQLESYPPIEYCVQYRESHLNFVLRLMEQFGIYYFFRHEAGKHTMVLADSTSAHKPIPDLPKVRFAETDQSVRDDEEVLREWASERRFRSGKVVVKAFDFAKPTADTKSEKSAPGGYEKDSMEVFLYPHKYKKGEEGDLGQKYVNATLHSLQSQDKRRYAAGNAPSIFPGGLITPEKLKPESEVQEYLVVSAQHTFVTETFRSGSGGKQGDPYYGHYVLQPKDRPFRAPIVTPKPVIYGPQTAVVVGPKGEEIHTDKYGRVKLQFHWDREGKKDEKSSRWVRVSQIWSGKQWGGFYVPRIGMEAVVEFIEGDPDRPLVVGTVYNAENMPPVEMPANQTQHGMKTRSSKGGGEANYNELVFEDKKGSEFIRMHAEKVLDVTVEDTESWVVNGKNRKGPGDAAVKTKIEKGDDVFDVLDGNQNTTISNDWTVNVGNDIFIEAGNQITLKVGISTIVMTKDAITVKSGTINTDAPFTNINATTVLDQKGGVIQLNCG*