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SCNpilot_cont_300_bf_scaffold_1667_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4682..5245)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DP6_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 184.0
  • Bit_score: 220
  • Evalue 1.50e-54
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 178.0
  • Bit_score: 223
  • Evalue 3.20e-55
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 184.0
  • Bit_score: 220
  • Evalue 4.60e-55

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Taxonomy

Nitratireductor basaltis → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGACGCCATCTCCTGAGTTCCGCGACGGGCTGCTCGCCGAGATCCCGAGTCTGCGGGCGTTCGCGATGTCGCTTTGCGGCAAGAGCGATCGCGCCGACGATCTGGTGCAGGAGGCGCTCGTCAAGGCGTGGGCGGCCCAAGCCAGTTTCACCCCAGGCACCAATCTGCGGGCCTGGCTCTTCACGATTCTCCGCAACGTCTATTTCGGCGAGCTGAGAAAGCGCAAGCGCGAGGTGGAGGATGTCGACGGCGTGCACGCCGCCGGGCTGTCGGTGTCGGGCGAGCAGGATGCGCGCGTGGACTTCACTGATTTTCAGAAGGCGCTTGCTCAGCTTTCCGCCGACCAGCGCGAGGTGCTGACACTGATCGGCGCGTCCGGCTTTTCCTACGAGGAGGCGGCCGAAATCTGCGGCGTCGCAGTCGGAACCATCAAAAGCCGGCTCAACCGCGCCCGCGTCAAGCTGTCTGAGATCCTGTCCATCGAAACGCTTGCCGACATCGGTCCGGAGCCTTCTTCGCGCGCCGTGCTGTCGCGCAACGCCGGGCTTGCGTCCGGTGCGTAG
PROTEIN sequence
Length: 188
MTPSPEFRDGLLAEIPSLRAFAMSLCGKSDRADDLVQEALVKAWAAQASFTPGTNLRAWLFTILRNVYFGELRKRKREVEDVDGVHAAGLSVSGEQDARVDFTDFQKALAQLSADQREVLTLIGASGFSYEEAAEICGVAVGTIKSRLNRARVKLSEILSIETLADIGPEPSSRAVLSRNAGLASGA*