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SCNpilot_cont_300_bf_scaffold_1015_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(4246..5226)

Top 3 Functional Annotations

Value Algorithm Source
putative periplasmic substrate-binding transmembrane protein n=1 Tax=Pseudomonas fuscovaginae RepID=UPI00028935E2 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 318.0
  • Bit_score: 198
  • Evalue 1.00e-47
Uncharacterized protein {ECO:0000313|EMBL:KIZ51771.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryzihabitans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 308.0
  • Bit_score: 203
  • Evalue 5.90e-49
putative periplasmic substrate-binding transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 294.0
  • Bit_score: 185
  • Evalue 3.70e-44

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Taxonomy

Pseudomonas oryzihabitans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGACATTGACACGCCGCAGCCTTGTCGCGGCTGGAGCGGCCGCTTTCACGATGCCCGCCCCCGCCGTATGGGCGCAGACCAAGCCGGTGACGCTCGGCATTCAGTACGGACTGCCCTATCTCAATTTCATCGTGGCCGAGAAGCTCGGAATGTTCACGAAAGCGGCCGAGAAGGCCGGCGTTCGCGATCCGAAATTCGTCATCAGTCGCCTCAGCGGTCCGACCGCCATCACCGAAGGTCTGCTCAGCGGCAACATGCAGGTCGGCGCGCTCGGCGCGCTCGGCCTGCTGATCGCTTACGAGAAAACCAAGGGCGTCTACAATCTCGGCGGCCTCAGCGCCTACTGGAAAGGCGTCTACACGATCTTCGCCAATGACCCGGCGATCAAATCGGTGAAGGATATCCGCCCGACCGACAAGATCGCGATGCCCGGTCCGACGAGTTCGCAGGCGATGATCCTGCGGCGCGCCGCCGAGCAGATTTTCGGGCCCGGCCAGGCCAACCGTTACGACAAGCAGATCGTCTCGCTCCCCCATCCGGACGCGGTCGCGGCGCTCACCACCGGCAACACCGTGCAGGTCTATTTCGCCTTGTCGCCGTTCGCGGAATTTCTGTCCCAGCAGAAGAACGTCCATGTGATCGGCACGACCAAGGAATTCAACCCGCCGGGCATGACCAACGGAGTCGTCGGCGCGCTCAAGAAGTTTGTCGACGAGAACAAGGAGCTGTCGATGGCGATCATCGCGGCGCTCGATGAAGCGGCCGCCTTCATCCGCAACGACGCGAAGGAAACCGCGAAGATTTATCTGGCCGCCGAACCCAGCAAGCTCGGCGAAGCCGAGATGGTCAAGATCATGGAAAACAATCGCGACGAGTACACGACCGAGCNNNNNNNNNNCGGCGCCGGCGCGCTGGCAGGATGTCTTCTTCCCGCCGATCAATCAGGGAGCCGGCAGCTGACATGCCGTCGCCTGCGTTGA
PROTEIN sequence
Length: 327
MTLTRRSLVAAGAAAFTMPAPAVWAQTKPVTLGIQYGLPYLNFIVAEKLGMFTKAAEKAGVRDPKFVISRLSGPTAITEGLLSGNMQVGALGALGLLIAYEKTKGVYNLGGLSAYWKGVYTIFANDPAIKSVKDIRPTDKIAMPGPTSSQAMILRRAAEQIFGPGQANRYDKQIVSLPHPDAVAALTTGNTVQVYFALSPFAEFLSQQKNVHVIGTTKEFNPPGMTNGVVGALKKFVDENKELSMAIIAALDEAAAFIRNDAKETAKIYLAAEPSKLGEAEMVKIMENNRDEYTTEXXXXGAGALAGCLLPADQSGSRQLTCRRLR*