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SCNpilot_cont_300_bf_scaffold_347_curated_66

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 91510..91917

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 133.0
  • Bit_score: 233
  • Evalue 1.30e-58
Ribonuclease VapC n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNU2_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 1.00e-57
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 3.20e-58

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGATCGCAGTTGATACCTCGGTCATTTTAGCGATGGCTCTGAAAGAGCCGGAGGCCGAACGGTTTACGCCGGTGCTGAGGCGGGAGGCCGTAGCGATTGGCTGGCCGACTTTGCTCGAGGCCTGCATGGTGTTGACCGGCAGGGGATTTCCGAATGCTGCGGACATAGTCGATCAGCTTGTCCGGTTGCCGAACGTGACCGCGATCGCTTTCGACGAAAAGCATTACCGGGAAGCGGAACAAGCGTTCGACCGCTTTGGCAAAGGCCGCCACCCGGCGGGGCTCAATATGGGCGATTGCTTTTCTTACGCTGTTGCCGCGGTCGCCAAGGCGCCCCTGCTCTTCAAAGGCAACGATTTTGGCCAAACCGATCTCATCTGCCATCCGGTTTCTGCCGCAGGCGGCTGA
PROTEIN sequence
Length: 136
MIAVDTSVILAMALKEPEAERFTPVLRREAVAIGWPTLLEACMVLTGRGFPNAADIVDQLVRLPNVTAIAFDEKHYREAEQAFDRFGKGRHPAGLNMGDCFSYAVAAVAKAPLLFKGNDFGQTDLICHPVSAAGG*