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SCNpilot_expt_1000_bf_scaffold_1595_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 25996..26592

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YG23_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 198.0
  • Bit_score: 336
  • Evalue 1.50e-89
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 198.0
  • Bit_score: 336
  • Evalue 4.70e-90
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEH89135.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 198.0
  • Bit_score: 336
  • Evalue 2.10e-89

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Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGGGGACAAGTCCTCTTCGGAGGGGCGGCGCGAGCCCAGGGACGAAACCCTAGCACGCGATGACGGCACCGACGCGAGCGCCCTGGTCGAGCTTTCCGGGGCGATCAAGTGGTTCGACGTGGCCAAGGGCTACGGCTTCATCCTTCCCGACGATCCAGACCACGGCGACATCCTGCTGCATGTGACGTGCCTGCGGCGCGACGGCTTCCAGACGGCGCTCGAGGGCGCGCGGGTGCTGGCGCTCGCCAAGCAGGGCGACCGCGGCCTGCAGGCCTTCCGCATCCTGTCGATGGACACGACGACGGCGATCCACCCGTCGGAGCAGCCGGACCAGCGCACCCATGTCGTGGTGACGCCCGAGAGCGGGCTGGAGCGGGCGCTGGTCAAGTGGTTCAACCGCACCAAGGGTTTTGGGTTCCTGACCCGCGGCGAGGGGACGGAGGACATCTTCGTCCATATGGAGACGTTGCGCCGCTACGGCGTCACCGAGCTCAGGCCCGGGCAGGTGGTCCTCGTGCGCTTCGGGCGCGGCGAGAAGGGCCTTATGGCTGCCGAAATCTATCCCGATATGGGAACGCTGCCGGTTTCGCACTGA
PROTEIN sequence
Length: 199
MGDKSSSEGRREPRDETLARDDGTDASALVELSGAIKWFDVAKGYGFILPDDPDHGDILLHVTCLRRDGFQTALEGARVLALAKQGDRGLQAFRILSMDTTTAIHPSEQPDQRTHVVVTPESGLERALVKWFNRTKGFGFLTRGEGTEDIFVHMETLRRYGVTELRPGQVVLVRFGRGEKGLMAAEIYPDMGTLPVSH*