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SCNpilot_cont_300_bf_scaffold_997_curated_17

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 18127..18690

Top 3 Functional Annotations

Value Algorithm Source
Transposase n=2 Tax=Rhizobium sp. RepID=L0NMA8_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 118.0
  • Bit_score: 152
  • Evalue 4.90e-34
Transposase {ECO:0000313|EMBL:CDN96533.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 126.0
  • Bit_score: 183
  • Evalue 2.80e-43
transposase similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 117.0
  • Bit_score: 148
  • Evalue 1.70e-33

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
TTGATCATGGCAATCGAAACTTGCATGAACCAACCCCCGAAACACCGGGGCGCATCAACTTCGCCGGGCACATCGGCAGTCCCGCAAGGATGTATGCGAGACGGTACATGCCTTAAGCAGAGAAGGCCTCACCAGCTCGGACATTGCACGTCGTACAGGATATGGCCGACGAAGCGTTCCTCACCCCAGTGTTGGAAGGATGGTAACCGCCGTGGGCGGCATTTGTTTCATGACATAAAGCACCGAGGATACACCGGCAGCTTTTCTAATCTGGAGTGCCTCCTGGCAGCTTGGCGCCGCGCCGAGAAGCCGGAAAAGGAAAAGGGTGATGCGGCGCCGGCTTGGATTGGGCGCACCGGCAGAACATATGACAATGCGCCTGTGCGTGATCCGCAAACCAGTCATTTGATCTCACCCATTGTCGCCGCTACTCTTTGCATCAAGCCACGCGGGGCACTGACCATCCATCAGGCGCGGAAAGTCGATGCCCTCAAACAGGGATCACAAACATTCGCCGTCTGCCCCGGAGCAACGGTCAGGCAGAAGGCCAGATCAACCGTTTGA
PROTEIN sequence
Length: 188
LIMAIETCMNQPPKHRGASTSPGTSAVPQGCMRDGTCLKQRRPHQLGHCTSYRIWPTKRSSPQCWKDGNRRGRHLFHDIKHRGYTGSFSNLECLLAAWRRAEKPEKEKGDAAPAWIGRTGRTYDNAPVRDPQTSHLISPIVAATLCIKPRGALTIHQARKVDALKQGSQTFAVCPGATVRQKARSTV*