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SCNpilot_expt_1000_bf_scaffold_2820_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 2..802

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 266.0
  • Bit_score: 524
  • Evalue 1.20e-145
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 266.0
  • Bit_score: 515
  • Evalue 9.90e-144
lysyl-tRNA synthetase n=1 Tax=Rhizobium giardinii RepID=UPI00037D937D similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 266.0
  • Bit_score: 517
  • Evalue 1.10e-143

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GAGCTCTACCTCAAGCGCACGCTGGTTTCCGGCCTCACCGACAAGGTGTTCGAGATCAACCGCAACTTCCGCAACGAAGGCGTCTCCACCCGGCATAACCCGGAATTCACGATGATGGAGTGCTACTGGGCCTATGCCGACTACGAGGACATCATGGACCTCGTGGAGCGGATGTTTGCCGAGCTGGCCGTGAAAATCCACGGCACGACCGAATTTGCCTTCGGCGACAAGCAGCTCTCCTTCAAGGGCCCGTTCAAGCGCGTGCCGATGCCCGATGCCGTCAAGGAAGCGACCGGCATCGATTTCCTGTCGATCAAGACCGACGAAGAAGCCCGTGCTGCCGCCAAGGCCGCCGGCTTTGCGGTCGAGAAGGACTGGACCTGGGGCGAGTGCCTGGCCTTCATCTTCGAGGAGAAGGTCGAGCCGACGCTGATCCAGCCGAGCCATGTCACGCATTTCCCGAAGGACATCTCGCCCTTCGCGAAGGAAGTGCCGGGCGAACCGCGCCTCGTCGAACGTTTCGAGACCTATTGCAACACCTGGGAACTCGGCAACGCCTTCTCCGAACTCAACGATCCGGAAGAGCAGCGCCGCCGCATGGTGGAACAGCTCGATCAGGCGCATGCCCGCGGCGAGAAGGAAAAGCAGCTCGACGACGAATTCCTCGATGCCATGGACCAGGGCATGCCCCCCGCCGGCGGCCTCGGCATCGGTGTCGACCGCCTGGTAATGCTGCTCACCAACTCCCCGTCGATCCGCGACGTCATCCTCTTCCCGGCGCGCCGCAGCAAGAACGATTGA
PROTEIN sequence
Length: 267
ELYLKRTLVSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDIMDLVERMFAELAVKIHGTTEFAFGDKQLSFKGPFKRVPMPDAVKEATGIDFLSIKTDEEARAAAKAAGFAVEKDWTWGECLAFIFEEKVEPTLIQPSHVTHFPKDISPFAKEVPGEPRLVERFETYCNTWELGNAFSELNDPEEQRRRMVEQLDQAHARGEKEKQLDDEFLDAMDQGMPPAGGLGIGVDRLVMLLTNSPSIRDVILFPARRSKND*