ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11847_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1466..2305

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator, RpiR family protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEDDA similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 275.0
  • Bit_score: 177
  • Evalue 2.10e-41
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:KFC72778.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 279.0
  • Bit_score: 455
  • Evalue 7.40e-125
Transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 285.0
  • Bit_score: 171
  • Evalue 2.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAACCTGACGGAGATCATCGCGGCGCGCCGGGACGAGCTGACAGAGTCAGACCGTCGGCTGGTCGAGGTTCTCCTGGCCAATCGCACGGCGGGCAGCTTCCTGCCGTCGCACAAGGTCGCCGAGCAGGCTGGCGTGCACGCCTCGACCGCCGGCCGCCTCGCCCGCAAGCTCGGCTTCGCCTCCTATCGCGAGATGCGCGGCGCCTTGCAGGATACCGTCGTCGCCGACCTCGACGCGTCCGTCCGGGTGCGACGCCGGCTCGACCGGGGGCAGGGCCATTCCTTGCTGGGCTCCGTCGTCGAGGGCGAAATCCGCGCGCTCGGCGCGCTTGTCAGCCAAATCTCGGATGCCGAGATCGTCGCTGCGGCCGACATGCTGCGGCAGGCCGGGCGCATCCTCGTCGCCGGTGAGGGTCATGCCAGTAGCCTCGCCGATCTGTTCGTGCGACGCCTCGTCCGCTCCGGCTATCGCGCAACGGTCGTCGCCCATGCCGACTGGCAGGCGGCCGACCAGTTGCTCGGCCTGGCCGCTGGCGATGTCGTGATCGCGCTGATCTTCCGCCACGAAAGCCCGGCGATGACGCGCATCGTCGCCTGCGCCCGCGAGATCGGAGCGAAGACGCTCCTGATCACCGACCGGCGCACCGGCGTCCCGGCTTGCGACCTTCAGCTCGTCGCCGCCCGAGGCGAGCAGGGCGAATTCCATTCGCTGACCGTGCCGATGGCGATCTGCAACACGCTGATCCTGGAGCTGTCGCGCACCGATGACGGCCGCTCGCTGGAAACGCTGGCGAAGGTCGAGACCCTGCAACGCCTGTTTCGCGGCAAGCCCGGCTAG
PROTEIN sequence
Length: 280
MNLTEIIAARRDELTESDRRLVEVLLANRTAGSFLPSHKVAEQAGVHASTAGRLARKLGFASYREMRGALQDTVVADLDASVRVRRRLDRGQGHSLLGSVVEGEIRALGALVSQISDAEIVAAADMLRQAGRILVAGEGHASSLADLFVRRLVRSGYRATVVAHADWQAADQLLGLAAGDVVIALIFRHESPAMTRIVACAREIGAKTLLITDRRTGVPACDLQLVAARGEQGEFHSLTVPMAICNTLILELSRTDDGRSLETLAKVETLQRLFRGKPG*