ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5234_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6903..8168

Top 3 Functional Annotations

Value Algorithm Source
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 394.0
  • Bit_score: 619
  • Evalue 4.50e-174
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 394.0
  • Bit_score: 584
  • Evalue 3.60e-164
Histidine ammonia-lyase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2N3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 394.0
  • Bit_score: 619
  • Evalue 3.20e-174

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
GTGGGCGAGCCGCTGCCGGTGCCGGTGGTGCGGCTGATCATGGCGCTGAAGATAGCCAGCCTGGCCCAGGGCGCATCGGGCGTCCGCTGGCAGACGCTGGAGCATCTGCTGCGCTGCCTGCAGCACGATCTCGTTCCGGTCATCCCGGCGCAGGGCTCCGTCGGCGCCTCCGGTGACCTGGCACCGCTCTCGCACATGACGGCGGCAATGATGGGCGTCGGCGAATTTGTCGTTGCCGGCACCAGGACCGATGCGGCGGCAGCGCTGGCGGCCAAGGGCCTGGCGCCGCTCGTGCTCGGCCCCAAGGAAGGGCTGGCCCTTCTCAACGGCACGCAGGTATCGACAGCCATGGCGCTGGCCGGGCTTTTCGAAGCCGAACGGGTGTTTGAGGCAGCCCTGGTTGCCGGCGCGCTCAGCGTCGATGCCGCCAAGGGTTCGGACGGCCCGTTCGATCCGCGCATCCAGGCGCTGCGGCGCCATCGCGGCCAGATCGAGGTGGCCGACGCCTTGCGCCGGCTGATTGCCGGCTCCCCCATCCGCCAGTCGCATCTGGTCGGCGATACGCGGGTGCAGGACCCCTATTGCCTGCGCTGCCAGCCGCAGGTGATGGGCGCAAGCCTCGACCTCCTGCGCCAGGCCGCGACGACGCTTGCCGACGAAGCCAACGGCGTCTCCGACAATCCGCTTGTCTTCACCGACACCGGGGAAGTCATTTCCGGCGGCAACTTCCATGCCGAACCGGTGGCTTTCGCCGCCGACATGATCGCCATGGCGCTCTGCGAGATCGGTTCGATCTCGGAGCGGCGCATCGCCATGCTGGTCGATCCGGCCCTCTCCGGCCTGCCGGCCTTCCTCACACCGGTTCCCGGCCTGAATTCGGGCTTCATGATCGCGCAGGTAACGGCCGCCGCACTGGTTTCGGAAAACAAGCAGCGCGCCTATCCGGCCAGCGTCGATTCCATCCCGACCTCCGCCAACCAGGAGGATCACGTCTCGATGGCGGCGCATGGCGCCCGGCGCTTGTCGGCCATGGCGGAAAACACCGCCAATGTCATCGGCATCGAGGTTCTTGCGGCGGCGCAGGGCTGCGATTTCCACGCGCCGCTGGTTTCCAGCCCGGCGCTGGAAGAGGCCCGCGGCCGCATCCGCGCCGACGTGCCGACACCGACGGAGGACCGCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGAGGAATTGCAACACTCCCGTGAACGCGGGTTCACGGGAGTGA
PROTEIN sequence
Length: 422
VGEPLPVPVVRLIMALKIASLAQGASGVRWQTLEHLLRCLQHDLVPVIPAQGSVGASGDLAPLSHMTAAMMGVGEFVVAGTRTDAAAALAAKGLAPLVLGPKEGLALLNGTQVSTAMALAGLFEAERVFEAALVAGALSVDAAKGSDGPFDPRIQALRRHRGQIEVADALRRLIAGSPIRQSHLVGDTRVQDPYCLRCQPQVMGASLDLLRQAATTLADEANGVSDNPLVFTDTGEVISGGNFHAEPVAFAADMIAMALCEIGSISERRIAMLVDPALSGLPAFLTPVPGLNSGFMIAQVTAAALVSENKQRAYPASVDSIPTSANQEDHVSMAAHGARRLSAMAENTANVIGIEVLAAAQGCDFHAPLVSSPALEEARGRIRADVPTPTEDRYXXXXXXXXXXXXXLRNCNTPVNAGSRE*