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SCNpilot_expt_1000_bf_scaffold_1415_curated_26

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(26853..27935)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system substrate-binding protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PPG4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 358.0
  • Bit_score: 530
  • Evalue 1.30e-147
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP73061.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 360.0
  • Bit_score: 531
  • Evalue 1.00e-147
potD; spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 357.0
  • Bit_score: 490
  • Evalue 3.50e-136

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGCGTCGGGAAAGAGGGAAACGAGATGAAAACCGGGAAAAGGCCTGGCGCTTGCATGCGCCGTTTTCTGCAGTCCGCCACCGCGCTTGCGGCCATCGCCCTTGCCGCGCCGACACTGGCGCAGGATGAGCTGAACGCGCTGGTCTGGTGCGACCACACCGATCCGACGCTGATCGAGCCGTTCGAGCAGGCCAACAACGTCAAGGTCAATCTCAAGGATTTCGAGGGCACGGGCGCCGGCCTGTCGATCATCGAGCAATCGCAGCCGGGTGACTGGGACGTCATGGTCATCGACGGCGTCGACGTGCAGCGCGCCCTCGACATGGACCTGTTCGCCGAACTGCCGGCCGATGCCCTGCCGACGGCGGATATCTTCCCGGAGGTTCGCCTCGACAAGAACAACAGCCGCGACGGCAAGATCTACGCCGTCACCGAAAANNNNNNNNNNGTCGATGTGAGCGACATGAAGAACCTGGCGTCGCTGTGGTCGGAAAAATATAAGGGCCGCATCGCGATCTACGATTATTACCTGCCGCTGATCGGCATCGCCGGCCTGGAACTCGGCAAGAAGACCGCTGATCTCACCGACGCCGATCTGCCCGCCATCAAGGACAGGCTGGTGGCGCTGAAGCAGAATTCCAAGCAGGTCAGCGACGTCGTCTCCTCGCAGACGGCGCTAGCGACCGGCGAAGTCGACATACTGCTCGGCGGCGGCGAGTGGATCACCGGCGTGCTCTCGGCCGACAAGCCGGACCTCGACTGGACGATCCCGGACCAGGGCGGCCTGCTCTGGACCCAGTCCATCGCCGTGCTCAAGACCTCGAAGAAGCAGGAACTGGCGCGTAAGTTCGTGCAGTATATCGTCAGCCCCGAGGGCCAGGCGCGGCTTGCCACCTCCTCCTGCTACTGGGCGATGCCGGCCAACAGCAAGGCGGGCGATCATCTGACAGACGCCCAGAAGGCGGCGTTGCGCTGGAGCGACCAGGCATCGTACCTGCCGAAGACCCAGCTCTATCCGATGCCGAGCGCCGAGCTGGACCAGAAGATGCAGGATGTCTGGACGGAGATGTTGCAGCAGTAA
PROTEIN sequence
Length: 361
MSVGKEGNEMKTGKRPGACMRRFLQSATALAAIALAAPTLAQDELNALVWCDHTDPTLIEPFEQANNVKVNLKDFEGTGAGLSIIEQSQPGDWDVMVIDGVDVQRALDMDLFAELPADALPTADIFPEVRLDKNNSRDGKIYAVTEXXXXVDVSDMKNLASLWSEKYKGRIAIYDYYLPLIGIAGLELGKKTADLTDADLPAIKDRLVALKQNSKQVSDVVSSQTALATGEVDILLGGGEWITGVLSADKPDLDWTIPDQGGLLWTQSIAVLKTSKKQELARKFVQYIVSPEGQARLATSSCYWAMPANSKAGDHLTDAQKAALRWSDQASYLPKTQLYPMPSAELDQKMQDVWTEMLQQ*