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SCNpilot_expt_1000_bf_scaffold_3536_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 7443..8405

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036EA1C8 similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 320.0
  • Bit_score: 296
  • Evalue 3.60e-77
Uncharacterized protein {ECO:0000313|EMBL:EKS36340.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 315.0
  • Bit_score: 292
  • Evalue 5.60e-76
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 294.0
  • Bit_score: 233
  • Evalue 1.20e-58

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
GTGCTGCGCTTCACGACGGATGACATTCCTGCCGGAGATCGCTTTGACCACTGGCGCGAAGTACGCGGAAAAAGCGTCTTTGGCGTCACGATCGAATTGGAGCGCGAGAAGCGCGCCCAGTTTCGCGGCCAGTTCACTGCGGAGGTGTATGGCGGCGCCATCGTCTCCGAGATGGAGGCATCGGCCTATCGCGTCAGCCGCACGAAGCAGGATGTGGCGCGCTTGTCGGGTGACAACCTGCTGATCAGCTGGCAAGTCTCAGGTGGCGGGTGGATGGAAACGGGCCGCCGGCGCGACCTCTACCGCGTCGGAGCCCATGATCTGGCGGTTGGCCACTCGGACCAGACCTATAGGGCGATGCCGGAAGGCAACCGCGCCTTCCGTTACANNNNNNNNNNNNNNNNNNTCGCCGGGCGCGACTTCGCCTCGGACCGGCTTTTCGATCTGAGCCCCGCCCCTATCGAAGACCGGTCTTCCGTGAAGCAACCGTTGAGGGCGCTGTTTTCAGCGATCGGCGCACGCGACGCCTTCCTGGGCGATCCCGAAGACTGCATCGACGCCATCGGGCGGCTGGCGTTGATGGCGACAGGCAAGCTGCGGCTGCATGACCCCGAGAACCGGACGGCGCTGCGCATGGCGCTGTATCACATGGCTTGTGACATCCTCCGCCGCGATCTCCGCCGGCCGGAACTGTCGCCGGCGCACGTCGCCCGCGAACTGTCCATCTCGCCACGGCAACTGCACATCTTGTTCGAGCCCTCCGGCCGCTCTTTTGCCCGCACGCTGGCCGGCCTGCGGCTGGAGCGTGTTCGCGGCCTGTTGCGCGGCCGGCCGGAGCGCAATGTCGCCGAAATCGCCTTTGCCTGCGGCTTCGACAGCCTGGCGACCTTCTACCGCGCCTTCCGCGCCGCCTATGGCATGACCCCATTGGATGCGCGCGCCGGGCCGCACGCCGACGCCTAA
PROTEIN sequence
Length: 321
VLRFTTDDIPAGDRFDHWREVRGKSVFGVTIELEREKRAQFRGQFTAEVYGGAIVSEMEASAYRVSRTKQDVARLSGDNLLISWQVSGGGWMETGRRRDLYRVGAHDLAVGHSDQTYRAMPEGNRAFRYXXXXXXXAGRDFASDRLFDLSPAPIEDRSSVKQPLRALFSAIGARDAFLGDPEDCIDAIGRLALMATGKLRLHDPENRTALRMALYHMACDILRRDLRRPELSPAHVARELSISPRQLHILFEPSGRSFARTLAGLRLERVRGLLRGRPERNVAEIAFACGFDSLATFYRAFRAAYGMTPLDARAGPHADA*