ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_80_curated_28

Organism: scnpilot_dereplicated_Rhodospirillales_1

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 32298..32789

Top 3 Functional Annotations

Value Algorithm Source
carbon-monoxide dehydrogenase small subunit (EC:1.2.99.2); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 156.0
  • Bit_score: 263
  • Evalue 4.10e-68
ferredoxin n=1 Tax=Ruegeria conchae RepID=UPI00023796AE similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 159.0
  • Bit_score: 265
  • Evalue 3.50e-68
Ferredoxin {ECO:0000313|EMBL:KHK91204.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 161.0
  • Bit_score: 270
  • Evalue 2.00e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGCAAGATTCACGTCACCACCACCGTCAACGGCGAACCCGCCGAGTTTCTCTGCCAGCCGGGCAACAGCCTGCTGGACGCGCTGCGCGACGACCTGAACCTGACCGGCAGCAAGGAAGGCTGCAGCAGCGGCGATTGCGGCGCCTGCAGCGTGATCGTCGACGGGCGGCTGGTCTGCTCCTGCCTGATGCTGGCCGTGGAGGCCGAAGGCAAGTCGATCACCACCATCGAGGGTATCGCCAACGGCGACGTGCTGCACCCGCTGCAGCGCAAGTTCCTGGAGCATGCCGCGCTGCAATGCGGCTTCTGCACCCCGGGCTTCCTGGTTGCGGCCAAGGCGCTGCTGGACCACAATCCGGACCCGACCGAAACCGAGGCACGCTATTGGCTGGCCGGCAATCTGTGCCGCTGCACCGGCTATGACAAGATCATCCGTGCCGTTCTCGATGCCGCCGCCGAGATGCGCGCCGGCGCACCCGCTGGGGAGTGA
PROTEIN sequence
Length: 164
MSKIHVTTTVNGEPAEFLCQPGNSLLDALRDDLNLTGSKEGCSSGDCGACSVIVDGRLVCSCLMLAVEAEGKSITTIEGIANGDVLHPLQRKFLEHAALQCGFCTPGFLVAAKALLDHNPDPTETEARYWLAGNLCRCTGYDKIIRAVLDAAAEMRAGAPAGE*