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SCNpilot_bf_inoc_scaffold_129_curated_13

Organism: scnpilot_dereplicated_Solirubrobacterales_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 11448..11852

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 129.0
  • Bit_score: 109
  • Evalue 4.80e-21
Probable ribonuclease VapC id=1763904 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 132.0
  • Bit_score: 101
  • Evalue 7.10e-19
PIN domain protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 130.0
  • Bit_score: 98
  • Evalue 1.90e-18

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Taxonomy

Sphingomonas sp. SRS2 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
TTGATCCTGGTTGATTCCAGCGTCTGGATTGACGCGATCAGGGGAAAGCAGGAGCCGCAATGTGAGACATTGGCCGAGTTGCTCGCCCGCGGAGAAGTCGTCTGCCTGAACAGTCTGATCCTGACCGAGGTGCTGAGGGGAAGTCACTCAGACGATGAACTCAACCATGTTGCGCGGCAACTTCGGCGCCTTCCATTTCTGGAACTCGACGCTCCCCACGATCACATCCAGGCTTCCCGTCTCTACCGCTCGGCCCGGGCGTCCGGTGTCACGGTCAGTGGAGTCGCGGACCTCCTGATCGCCGCCACCTGCATCGAGTTCGAGGCGACCCTGCTTCACAACGACCGCGACTTCGACAACCTGGCCACGGTCTCGGACCTGAAGGTCTGGCGACCAGCAGGCTGA
PROTEIN sequence
Length: 135
LILVDSSVWIDAIRGKQEPQCETLAELLARGEVVCLNSLILTEVLRGSHSDDELNHVARQLRRLPFLELDAPHDHIQASRLYRSARASGVTVSGVADLLIAATCIEFEATLLHNDRDFDNLATVSDLKVWRPAG*