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SCNpilot_expt_1000_bf_scaffold_9414_curated_1

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(26..601)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Niabella aurantiaca RepID=UPI0003705A45 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 191.0
  • Bit_score: 250
  • Evalue 1.40e-63
RNA polymerase sigma70 factor {ECO:0000313|EMBL:AHF14781.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 187.0
  • Bit_score: 242
  • Evalue 5.20e-61
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 180.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
TTGGCGAAACTTTTTAAAATACAAGCTGCGTCCGATATACCGGACGAAAAATTGCTGGACGATTTCAAATCGACCGGCGATCAGGAAGCGCTCGCCACTCTTTATCTCCGCTACAGCGACCTGCTTTACGGTACCTGCCTCAAATACCTTGAGGATAGCGAAGAAGCTAAAGATGCCGTGATGAATATTTACCAGGAATTACTACGTAAACTGCCCGGCCAGGAGGTGAGTAATTTTAAAAGCTGGGTGTATGTAGTGGCGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTAATTTAGACGGCGCAAATGTGCAATCGGGCGATTTTTCGCATCTTGATGATGTATTAAATAAGGAAGCAGAATTTAAAAGGCTGGAACAGTGCATGGAGGCCTTATCGGACGAACAGAAAAAGAGCATACAATTGTTTTATTATCAAAACAAATGCTATAACGAAATAGCGGAAGAAACCGGGTTGGAATGGAATAAAGTGCGGAGCCTGATTCAAAATGGACGAAGAAACCTTAAAATTTGCATGGAAAAAAATGGCGGCTGA
PROTEIN sequence
Length: 192
LAKLFKIQAASDIPDEKLLDDFKSTGDQEALATLYLRYSDLLYGTCLKYLEDSEEAKDAVMNIYQELLRKLPGQEVSNFKSWVYVVAKXXXXXXXXXXXXXXXVNLDGANVQSGDFSHLDDVLNKEAEFKRLEQCMEALSDEQKKSIQLFYYQNKCYNEIAEETGLEWNKVRSLIQNGRRNLKICMEKNGG*