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SCNpilot_expt_1000_bf_scaffold_18527_curated_4

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 2342..3124

Top 3 Functional Annotations

Value Algorithm Source
Response regulator of the LytR/AlgR family n=1 Tax=Methylomicrobium album BG8 RepID=H8GNE2_METAL similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 256.0
  • Bit_score: 233
  • Evalue 2.30e-58
Two-component response regulator {ECO:0000313|EMBL:GAM99990.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 257.0
  • Bit_score: 245
  • Evalue 1.10e-61
response regulator receiver protein; K02477 two-component system, LytT family, response regulator similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 262.0
  • Bit_score: 217
  • Evalue 7.10e-54

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGTCCGAGCTCACGATTCTGATTGCCGATGATGAGCCGCTCGCCGCGCGGCGGCTGCGCGTCCTCATCGAGCGGCGACCGGATCTGCGGCTCGTCGGCACGGCGCGGGACGGGGAGGAAGCCATTGAGGCGATCCGCGCGCTCAGGCCCGATGTTCTGCTGCTCGACGTGCAGATGCCGGGGCTGGACGGCTTCGAGGTGGTCGAGCGGCTGGCTGGCACGTTCCCGCCCGCGGTGATCTTCGTCACGGCCTTCGACCATCACGCGCCGCGCGCTTTCGAGGCGCGGGCGCTCGACTATCTGGTGAAGCCGGTGGAAGCGCAGCGCCTCTATGATGCGCTCGACCATGCGCGCGAGCGCCGGGACCAGATGGAGGCCCGCAGCCAGATCGAGGAGCTGCGCGAGATCATCGCCAATCTGCGCCGCGGCGGCGCGCCTGCCGCGCCTGCGCCGCGTTTCGAGAGCGAGTTCTGGGTGAAATCGCTGGGGGAGACCGTGCGCGTCCCGGTCGAGGAGATCGAGCGGATCGAGGCGGAGCGCGATTATGTCCGCCTGCACACGGCCGGGCGCTCCTTCCTCCACCGCGAACCGCTGGGCGATATCGAGAAGCGGCTGGACCCGCAGGCGTTCCTGCGCGTCCATCGTTCGACGATCGTGCGCCGCGATTGCGTCGCGGCCATCGGCAAGTCCGCTTCGCGCACGCCCGTCCTGCGGCTCGCTTCGGGGGAGCAGGTGTCCGTGGGCCGAAGCTATGCGGACCGGCTCCAGAAGCTGCGCGGCTAA
PROTEIN sequence
Length: 261
MSELTILIADDEPLAARRLRVLIERRPDLRLVGTARDGEEAIEAIRALRPDVLLLDVQMPGLDGFEVVERLAGTFPPAVIFVTAFDHHAPRAFEARALDYLVKPVEAQRLYDALDHARERRDQMEARSQIEELREIIANLRRGGAPAAPAPRFESEFWVKSLGETVRVPVEEIERIEAERDYVRLHTAGRSFLHREPLGDIEKRLDPQAFLRVHRSTIVRRDCVAAIGKSASRTPVLRLASGEQVSVGRSYADRLQKLRG*