ggKbase home page

SCNpilot_expt_1000_bf_scaffold_16223_curated_6

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 5912..7216

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLX8_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 31.2
  • Coverage: 448.0
  • Bit_score: 171
  • Evalue 1.80e-39
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 439.0
  • Bit_score: 139
  • Evalue 1.80e-30
Hypothetical glycine-rich protein {ECO:0000313|EMBL:BAB48146.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 107.0
  • Bit_score: 139
  • Evalue 1.10e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGGTCGCGGCGCTGCTTTGCGGCGGCTCGCTCGCAGCCTATTCGCCATCGCTTTTGGCGCAGCAGGGCGAGCCGGCGGCTGATATTGCGGCAATCGTTCGCCAGCTTCAGGCCAGGGTTGAAGAACTCGAAGGCGACAACAAGCGCATGCGCGGCGAGATTGACGCGATGAAGGGCGCTCCCGCAGGTGCGGTTCCCAGTTCGGGAGGCCAGGCGGCAAGCGCCGAGGGCGGGGATTCAACTGCACGCTCCGCAGGGGTTCTCGCGGCTGCGCCGGCCGCGACGGGACCAGCCGGACCAGTCGCGACGCCGGCTAAGTCTGCAACGCAGGCCCCCGGTGTTGTGGGCCGTCTCGCCCTGGGCGGCGGCGCTTTGGGCAAGAGCGAAGCGGCCGGCGCTCTCCAGGGTTCTATTGCGATTCCCCTCAGTAACGCCGCGAAGTTCCAGATCGATGCCGGCACGGCTCTTTCCTCCGATGCCCTCTACAGTGGGTTTGCGGGGCAGTTCTATGTCCGCGATCCCAAGAAGGGCGCTGTCGGCCTGTATGGAAGCTATTCGGCCGTCAACGCCTTCAGCGGCCGCGTCGAAGGAGGGGCGGCGGCCTCTTACTCGGTCGCGCGCCTGGGATTGGGAGGCGAGGCCTATCTGAACCGCTTCAGCATCGAGGCTCTGGCCGGTGTCGAGGGCGGCAGTCTCCAGACTCGCCTCTTCGATATCGTCGACATCGCTTATTATCCGGCGGACAACTGGCGGCTTTCCGTAGGTCACCGATATAGCGGCGGCGATAATTATCGTGCCGCTGGGCTTGAGTATCAGTTCAGCAGGACGGACAGCGCAGGCGTGTCCTTCTTCGCGGAAGGGCTTTACAGCAGCAGCACTGCGAAATCCGCCATGGCGGGTATTCGCGTTTACTTCGGCGGCGGCCGCAAGGCACTGATCGCCCAGCATCGGGAAGGTGGGCGTCCGTCCTATCTGGCGTTTGACCAGACGGTCCTCGCCGCCGAACGTGCGAAGCACGATATCGTTGGGCAGGTGGGTCCGACGGGGCCGACCGGCGCCACGGGAGCGACAGGCCCGACCGGCGCAACTGGCGCCACCGGAGAAACTGGCGCCACCGGAGAAACTGGCGCGACGGGAGCCACCGGACCAACCGGCGCTACTGGGCAGACGGGCGACACGGGAGCCACCGGTGCGACTGGCGACACCGGTGCGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACGGGTGCGACGGGTGACACCGGCGCGACTGGCGACACGGGTGCGACC
PROTEIN sequence
Length: 435
MVAALLCGGSLAAYSPSLLAQQGEPAADIAAIVRQLQARVEELEGDNKRMRGEIDAMKGAPAGAVPSSGGQAASAEGGDSTARSAGVLAAAPAATGPAGPVATPAKSATQAPGVVGRLALGGGALGKSEAAGALQGSIAIPLSNAAKFQIDAGTALSSDALYSGFAGQFYVRDPKKGAVGLYGSYSAVNAFSGRVEGGAAASYSVARLGLGGEAYLNRFSIEALAGVEGGSLQTRLFDIVDIAYYPADNWRLSVGHRYSGGDNYRAAGLEYQFSRTDSAGVSFFAEGLYSSSTAKSAMAGIRVYFGGGRKALIAQHREGGRPSYLAFDQTVLAAERAKHDIVGQVGPTGPTGATGATGPTGATGATGETGATGETGATGATGPTGATGQTGDTGATGATGDTGATXXXXXXXXXXXXXATGATGDTGATGDTGAT