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SCNpilot_expt_1000_bf_scaffold_9486_curated_1

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 23..1615

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein E n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRI5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 509.0
  • Bit_score: 886
  • Evalue 1.30e-254
gspE; general secretion pathway protein E; K02454 general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 509.0
  • Bit_score: 886
  • Evalue 4.20e-255
General secretion pathway protein E {ECO:0000313|EMBL:BAK66051.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 509.0
  • Bit_score: 886
  • Evalue 1.90e-254

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAGCAGCGCGCCCGGCGATCTGCCGCCGGAAGGCATGGGCGCGCCCGCTCCGGTGCCGCTGCCGGCGATCGCGCCTGACGAGACGTCCCAGCACGCGCTTCTTCCGATCGATATTCCATACACATTCGCGCGGAGGAATGGCGTCGTGCTGGTCTCCGGCAAGACGGACGAGGATCCGGGCCAGCGCATCGCCGTCGCGCTGCGTGAGGGCGCCGATCCGCGCGTGCTGGTCGAGGTGCGGCGGCATCTAGCGCGCAGTTTCGACGTTTCCATCGTCGATCAGCCCACGTTCGAGCGCTATCTTTCCGACCATTACGCGATGGAGGGTTCGGCCGCGGCGATGGCCGGCTCCCTCGCCATGGGCGGCGACGATCTGGACTTCATTGCAGGCGACCTGCCCACGGCGGAGGACCTGCTCGACAGCGGCGACGACGCCCCGGCCATCCGCCTCATCAATGGGATCATCGCCGAAGCCGCGCGCCAGGGTGTCAGCGATATCCACATCGAGCCTTATGAAACCGGCCTCGTCGTGCGCATGCGCATGGACGGCGTGCTGCGCGAGACGCTGCGCATGCCGCCGCATGTCGCACCCGTGGTGGTGAGCCGCGTCAAGGTCATGGCGCGGCTGGACATTGCCGAGCGGCGCGTCCCGCAGGATGGACGCATCGGGCTAACGCTGGGCGGCAAGATGCTCGACGTGCGTGTCTCGACCCTGCCGAGCCGGGCGGGGGAGCGCGTTGTCATGCGTATCCTCGACAAGGAGAATGCAGGCATTTCCCTCGATGTGCTCGGGCTCTCCGGCATGGCCGACGCGGTGTTCCGCAGCGCGCTGCATGAGCCCAATGGCATCATCCTCGTCACCGGCCCGACCGGCAGCGGCAAGACGACCACGCTTTATGCGGGCCTGCGCACGCTGAACGACGGCAGCCGCAACATCCTCACCGTCGAAGATCCGGTCGAATATGCGATCGAGGGCGTGGGCCAGACGCAGGTGAATGCCAAGGTCGGCTTGAGCTTCGCAGCCGGCCTGCGCGCCATTCTGCGTCAGGACCCGGACGTGGTCATGGTCGGCGAGATCCGCGACCGCGAGACGGCGGAGATCGCGGTGCAAGCGTCGCTCACCGGCCACCTCGTGCTCTCGACCGTCCACACCAACGATGCAGTCGGCGCGATCACCCGGATGCGCGACATGAAGGTCGAGCCGTTCCTGCTCGCCTCCACCCTGCGCGCGGTCATCGCCCAGCGGCTGGTGCGGCGGCTTTGCCCGGTTTGCCGCGAGCAGGTACCCGCCGACAAGTCGGTGAGCGCGCTGCTCGGCATTGACGAGGGCACGCTCATCTGTCGTCCGCGCGGCTGCGACGAGTGCAACCAGAGCGGCTACAAGGGCCGCGTCGGCGTGTTCGAGGCGATCCGCATCGACGACACGATCCGCCGGATGATCAACGAAGGCGGCGATGAATCCCTCATCTCCCGCCATGCCTTCCTGAATTCGCCCAACCTCATCTCGTCCGCGCGCGCGCTCGTGCTCGGCGGCGAGACCAGTGCCGAGGAAGCGATCCGCATCTCGCGGCGCGAAGCGATCGATGCCTGA
PROTEIN sequence
Length: 531
MSSAPGDLPPEGMGAPAPVPLPAIAPDETSQHALLPIDIPYTFARRNGVVLVSGKTDEDPGQRIAVALREGADPRVLVEVRRHLARSFDVSIVDQPTFERYLSDHYAMEGSAAAMAGSLAMGGDDLDFIAGDLPTAEDLLDSGDDAPAIRLINGIIAEAARQGVSDIHIEPYETGLVVRMRMDGVLRETLRMPPHVAPVVVSRVKVMARLDIAERRVPQDGRIGLTLGGKMLDVRVSTLPSRAGERVVMRILDKENAGISLDVLGLSGMADAVFRSALHEPNGIILVTGPTGSGKTTTLYAGLRTLNDGSRNILTVEDPVEYAIEGVGQTQVNAKVGLSFAAGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLVLSTVHTNDAVGAITRMRDMKVEPFLLASTLRAVIAQRLVRRLCPVCREQVPADKSVSALLGIDEGTLICRPRGCDECNQSGYKGRVGVFEAIRIDDTIRRMINEGGDESLISRHAFLNSPNLISSARALVLGGETSAEEAIRISRREAIDA*