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SCNpilot_expt_1000_bf_scaffold_13171_curated_6

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: comp(5562..5885)

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump outer membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMB4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 179
  • Evalue 2.20e-42
efflux pump outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 179
  • Evalue 6.80e-43
Efflux pump outer membrane protein {ECO:0000313|EMBL:BAK65369.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 107.0
  • Bit_score: 179
  • Evalue 3.00e-42

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGATCGCCAATTATGAAAAGGCCATCCAGTCCGCCTTCCGCGACGTGGCCGACGCGCTGGCGCAACGCCGCTGGCTGGAGGCGCAGATCGGCACGACGCAGCAAGCCATCGCCGCGCTGAGCGAACGCTCCCGTCTCGCCACGATCCGCTTCGAAGCAGGCCGCGCCGCCTATCTGGAGGTGCTGGACGCCGAGCGCGATCGTTTCTCGGCCGAACAGCAGCTCATCCAGCTGCGCCGCGCCTGGCTGGCCAGCGGCGTGGCGCTGTATGCCGCATTGGGCGGCGGCTTTCCCGAATCCGAACGGCAGAGGCAGACCCCATGA
PROTEIN sequence
Length: 108
MIANYEKAIQSAFRDVADALAQRRWLEAQIGTTQQAIAALSERSRLATIRFEAGRAAYLEVLDAERDRFSAEQQLIQLRRAWLASGVALYAALGGGFPESERQRQTP*