ggKbase home page

SCNpilot_expt_1000_bf_scaffold_11179_curated_1

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: 1..828

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS41_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 287.0
  • Bit_score: 361
  • Evalue 6.00e-97
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 287.0
  • Bit_score: 361
  • Evalue 1.90e-97
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 287.0
  • Bit_score: 361
  • Evalue 8.40e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GACAATATGCTGTTCTATGCCTCGGCGGCGACCGGGTACACGCTGCCGGGCTTCAATCCGCGCCCCCTGCAGCCGAGCCAGGCGACGCAATTCGCTGGCAATGACGACATTGCCTATGAACTGGGTAGCAAGATCGACCTGTTCGATCGCCGCCTGCGCATCAATACCGCGCTCTTCTATACCGATTTCAAGACCCGACCGGTGAGCATCACCGGCGGCGAGATCCTGCTGGCACCGGGCGGTGGACCAACGGCCGGCAATCAGGTGGTCATCCCGTCGCCCGGCGCGCCTGATGGCGTCACTACCTGCCGCAATCGCACCCAGGCGGAGATCGATGCGGGCGTTCCAGGCTATACCTGCGTCAACCGCAGCTTCTTCGTGAACACGCCGGCGAAGGTGCGCGGCTTCGAGATCGAGGCCACGGCCGAGCCGGTCGACGGGCTGCTGATCAACGGCGCGATGGGCTATAACAAGTTCACTTCGCCCGATCTCGTTCTGGCTTCGCGGCNNNNNNNNNATGAGATCCAGGGCGCACCGCTCGGCGGCACGATCACGCCGCGCCTGGACTGGACCTATCAGAGCAGCAGCACGACTGGCAGCCTGCAGACAACGCGCTGGAATCAGGGCCCCTATTCGCTGGTCAACGCTCGCGTCACCTACCGCTTGCGGGATGAGGGCCTGCAGATCGCAGTCGGCGCCACCAACCTGTTTGACAAGCTCTATTATCATAACTTCTTTGTTTATCAGGATAATGTTGGCGACGCGCAGGTTCAGGGTCAGCCCGGCGCGCCGCGCCAATGGTATGTGAACGTGCAGAAGACGTTCTGA
PROTEIN sequence
Length: 276
DNMLFYASAATGYTLPGFNPRPLQPSQATQFAGNDDIAYELGSKIDLFDRRLRINTALFYTDFKTRPVSITGGEILLAPGGGPTAGNQVVIPSPGAPDGVTTCRNRTQAEIDAGVPGYTCVNRSFFVNTPAKVRGFEIEATAEPVDGLLINGAMGYNKFTSPDLVLASRXXXXEIQGAPLGGTITPRLDWTYQSSSTTGSLQTTRWNQGPYSLVNARVTYRLRDEGLQIAVGATNLFDKLYYHNFFVYQDNVGDAQVQGQPGAPRQWYVNVQKTF*