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SCNpilot_expt_1000_bf_scaffold_4630_curated_1

Organism: scnpilot_dereplicated_Sphingobium_1

partial RP 37 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: comp(2..334)

Top 3 Functional Annotations

Value Algorithm Source
Putative efflux pump inner membrane protein n=1 Tax=Sphingobium sp. SYK-6 PF6_9SPHN">RepID=G2IPF6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 1.50e-51
putative efflux pump inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 95.5
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 4.80e-52
Putative efflux pump inner membrane protein {ECO:0000313|EMBL:BAK68137.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 2.10e-51

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGCGCCTCTCCCGCTTCTTCATCGACCGGCCCATCTTCGCCGCCGTCATCGCGATCATCATCACGATCATCGGGGCGATCGCCTATTTCTTCCTGCCGGTCTCGCAATATCCCGAGGTCGTCCCCCCGACCGTGACCGTCTCCGCCACTTATCCCGGCGCCTCCGCCGAGACCGTGGCCGAGACGGTCGCGAGCCCCATCGAGCAGGAGATCAACGGCGTCGAGAACATGCTTTACCAGTCGTCCCAGTCCACGGGCGACGGGCGCGTGGTCATCACCGTGACCTTCAAGCAGGGCACGAACCTGGATGACGCGCAGGTGCTGGTGCAGAAC
PROTEIN sequence
Length: 111
MRLSRFFIDRPIFAAVIAIIITIIGAIAYFFLPVSQYPEVVPPTVTVSATYPGASAETVAETVASPIEQEINGVENMLYQSSQSTGDGRVVITVTFKQGTNLDDAQVLVQN